HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:436.7 nTPM
HPA Brain:818.3 nTPM
GTEx:436.7 nTPM
FANTOM5:1115.0 Scaled Tags Per Million
Pig:1156.3 nTPM
Mouse:1668.0 nTPM
Allen mouse:24.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052504Antibody CAB002056
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 818.3
Sample id Sample description nTPM
Hippocampus
nTPM: 689.6
1898 Male, age 80, left hemisphere 903.3
1855 Male, age 76, left hemisphere 725.4
2529 Female, age 94, left hemisphere 722.9
2621 Female, age 67, right hemisphere 672.1
1911 Female, age 85, right hemisphere 569.9
2148 Female, age 91, left hemisphere 543.8
Dentate gyrus
nTPM: 665.3
2010 Male, age 76, both hemispheres 826.0
1927 Female, age 91, both hemispheres 772.5
2246 Female, age 85, both hemispheres 660.4
2528 Male, age 74, both hemispheres 650.0
2530 Female, age 94, left hemisphere 634.3
2531 Female, age 67, both hemispheres 448.7
Entorhinal gyrus
nTPM: 569.6
1938 Female, age 85, left hemisphere 729.0
2764 Male, age 80, right hemisphere 687.8
1787 Male, age 76, left hemisphere 642.1
2117 Female, age 91, right hemisphere 537.5
2686 Male, age 75, right hemisphere 422.6
2613 Female, age 94, left hemisphere 398.6
Hippocampus, CA1
nTPM: 818.3
2749 Male, age 80, left hemisphere 1231.5
2045 Male, age 76, both hemispheres 832.8
1873 Female, age 85, both hemispheres 796.9
2527 Male, age 74, both hemispheres 672.6
2082 Female, age 91, right hemisphere 557.4
Hippocampus, CA2
nTPM: 744.1
1892 Male, age 76, both hemispheres 1127.8
1963 Male, age 80, left hemisphere 846.3
2249 Male, age 74, both hemispheres 763.9
2437 Female, age 94, left hemisphere 601.7
1940 Female, age 85, left hemisphere 585.3
2113 Female, age 91, right hemisphere 539.5
Hippocampus, CA3
nTPM: 737.9
1867 Male, age 76, both hemispheres 1013.6
2137 Male, age 80, left hemisphere 918.6
2436 Male, age 74, both hemispheres 861.8
2620 Female, age 94, left hemisphere 606.8
1891 Female, age 85, both hemispheres 589.3
2861 Female, age 67, both hemispheres 437.6
Parahippocampal cortex
nTPM: 622.0
1850 Male, age 80, both hemispheres 806.8
1933 Female, age 85, both hemispheres 726.1
1990 Female, age 91, right hemisphere 687.1
2250 Female, age 67, right hemisphere 671.4
2245 Female, age 91, both hemispheres 662.7
2532 Female, age 72, left hemisphere 647.4
2018 Male, age 76, both hemispheres 610.2
2692 Male, age 74, both hemispheres 496.6
2693 Female, age 94, both hemispheres 464.2
2622 Female, age 67, right hemisphere 447.1
Perirhinal gyrus
nTPM: 772.6
1847 Female, age 91, left hemisphere 973.7
1841 Female, age 85, right hemisphere 785.8
1794 Male, age 80, right hemisphere 768.5
2848 Male, age 76, right hemisphere 725.1
2521 Female, age 94, right hemisphere 609.6
Subiculum
nTPM: 658.2
1901 Male, age 80, both hemispheres 738.5
2042 Male, age 76, both hemispheres 704.7
2438 Female, age 94, left hemisphere 695.0
1977 Female, age 85, both hemispheres 690.7
2619 Male, age 74, both hemispheres 604.5
2729 Female, age 91, right hemisphere 515.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 436.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 436.7
Samples: 197

Max nTPM: 1740.7
Min nTPM: 162.4
Std nTPM: 204.5
Median nTPM: 393.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 1740.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1267.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1130.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 1087.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 938.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 921.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 903.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 891.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 807.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 787.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 781.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1115.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1115.0
FF:10153-102I9 76 years, female 1162.4
FF:10169-103B7 60 years, female 1067.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1156.3
Pig sample Sample description nTPM
Subiculum
nTPM: 929.4
Samples: 4

Max nTPM: 1121.0
Min nTPM: 792.8
Sample A Female 1121.0
Sample B Female 840.5
Sample C Male 792.8
Sample D Male 963.4
Dorsal hippocampus
nTPM: 1156.3
Samples: 4

Max nTPM: 1441.1
Min nTPM: 891.8
Sample A Female 1441.1
Sample B Female 1219.3
Sample C Male 1072.9
Sample D Male 891.8
Entorhinal cortex
nTPM: 1007.7
Samples: 4

Max nTPM: 1193.6
Min nTPM: 827.7
Sample A Female 1085.0
Sample B Female 1193.6
Sample C Male 924.3
Sample D Male 827.7
Ventral hippocampus
nTPM: 993.8
Samples: 4

Max nTPM: 1296.1
Min nTPM: 728.3
Sample A Female 1296.1
Sample B Female 728.3
Sample C Male 894.2
Sample D Male 1056.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1668.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1572.8
Samples: 4

Max nTPM: 1745.4
Min nTPM: 1358.5
Sample A Male 1358.5
Sample B Male 1612.9
Sample C Female 1574.5
Sample D Female 1745.4
Hippocampal formation
nTPM: 1668.0
Samples: 4

Max nTPM: 1767.4
Min nTPM: 1626.2
Sample A Male 1643.9
Sample B Male 1626.2
Sample C Female 1767.4
Sample D Female 1634.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.8
75694450 Antisense, RP_060518_03_G08, Mouse strain C57BL/6J (56 days, male) 24.8

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