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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1019.0
nTPM
FANTOM5:
2183.5
Scaled Tags Per Million
Pig:
1581.0
nTPM
Allen mouse:
17.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1019.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 734.8
1984
Male, age 76, both hemispheres
918.1
2188
Female, age 91, both hemispheres
719.3
2090
Male, age 80, both hemispheres
653.1
2301
Female, age 85, both hemispheres
648.6
Dorsal cochlear nucleus nTPM: 674.2
2187
Female, age 91, both hemispheres
798.9
2802
Male, age 74, right hemisphere
761.4
2378
Male, age 80, both hemispheres
632.5
2370
Male, age 61, both hemispheres
624.9
2058
Male, age 76, both hemispheres
553.1
Dorsal tegmental nucleus nTPM: 757.8
2358
Male, age 61, both hemispheres
894.0
2083
Male, age 80, both hemispheres
774.5
2326
Male, age 74, both hemispheres
763.0
1936
Male, age 76, left hemisphere
599.9
Dorsolateral tegmental area nTPM: 739.8
2654
Male, age 80, both hemispheres
791.5
2751
Female, age 85, both hemispheres
790.1
2360
Male, age 74, both hemispheres
783.7
2337
Male, age 61, both hemispheres
732.2
2141
Male, age 76, both hemispheres
601.4
Kolliker-Fuse nucleus nTPM: 734.7
2163
Male, age 80, both hemispheres
902.5
2793
Female, age 91, left hemisphere
711.0
2315
Male, age 76, right hemisphere
590.6
Lateral lemniscal nuclei nTPM: 757.7
2036
Male, age 80, both hemispheres
925.8
2169
Male, age 76, both hemispheres
862.7
2746
Female, age 85, left hemisphere
749.7
2453
Male, age 74, right hemisphere
659.6
2320
Female, age 91, left hemisphere
590.9
Lateral parabrachial nucleus nTPM: 707.4
2139
Female, age 85, right hemisphere
943.0
2013
Male, age 80, both hemispheres
742.4
2790
Male, age 61, both hemispheres
603.5
2792
Male, age 76, both hemispheres
540.9
Lateral vestibular nucleus nTPM: 770.1
2184
Male, age 76, both hemispheres
803.3
2311
Male, age 80, both hemispheres
737.0
Locus coeruleus nTPM: 1019.0
2014
Male, age 55, unknown
1301.7
2123
Female, age 91, both hemispheres
1274.9
2788
Male, age 74, unknown
1094.7
2720
Male, age 74, both hemispheres
984.3
2317
Female, age 72, unknown
861.6
1980
Male, age 76, both hemispheres
824.6
2162
Male, age 80, both hemispheres
791.0
Medial parabrachial nucleus nTPM: 763.7
2170
Female, age 91, both hemispheres
930.9
2854
Male, age 80, both hemispheres
879.0
2463
Female, age 85, right hemisphere
750.7
2156
Male, age 61, both hemispheres
657.2
2786
Male, age 76, both hemispheres
600.7
Medial periolivary nuclei nTPM: 809.6
2171
Female, age 85, both hemispheres
1107.9
2063
Male, age 76, both hemispheres
899.6
2791
Male, age 74, right hemisphere
875.3
2081
Male, age 80, both hemispheres
608.6
2458
Female, age 91, both hemispheres
556.6
Motor facial nucleus nTPM: 749.8
2062
Male, age 76, both hemispheres
919.8
2365
Male, age 74, right hemisphere
917.4
2697
Female, age 85, both hemispheres
764.8
2795
Female, age 91, both hemispheres
662.8
2126
Male, age 61, both hemispheres
646.1
2327
Male, age 80, both hemispheres
588.2
Motor trigeminal nucleus nTPM: 634.7
2079
Male, age 80, both hemispheres
714.8
2560
Male, age 74, both hemispheres
660.5
2335
Male, age 61, both hemispheres
641.6
2309
Male, age 76, both hemispheres
581.1
2321
Female, age 91, both hemispheres
575.7
Nuclei of the trapezoid body nTPM: 786.7
2735
Female, age 85, both hemispheres
1008.7
1983
Male, age 76, both hemispheres
888.6
2159
Male, age 61, both hemispheres
816.3
2166
Male, age 80, both hemispheres
672.7
2368
Female, age 91, both hemispheres
547.4
Nucleus raphe magnus nTPM: 793.4
2172
Female, age 85, both hemispheres
1054.7
2455
Male, age 74, both hemispheres
942.9
2160
Male, age 61, both hemispheres
845.0
2051
Male, age 76, both hemispheres
672.3
2328
Male, age 80, both hemispheres
666.9
2459
Female, age 91, both hemispheres
578.8
Paramedian reticular nucleus nTPM: 813.3
2050
Female, age 85, both hemispheres
1058.5
2057
Male, age 80, both hemispheres
810.8
2313
Male, age 61, both hemispheres
707.6
2052
Male, age 76, both hemispheres
676.3
Pedunculopontine tegmental nucleus nTPM: 762.2
2334
Male, age 80, both hemispheres
783.3
2338
Male, age 61, both hemispheres
778.8
1921
Female, age 85, both hemispheres
724.4
Pontine nuclei nTPM: 883.7
1863
Male, age 55, unknown
1264.8
2787
Female, age 85, both hemispheres
1130.5
2109
Female, age 72, unknown
1007.1
2727
Male, age 61, right hemisphere
850.0
2454
Male, age 74, left hemisphere
821.1
1968
Male, age 76, left hemisphere
726.5
2319
Female, age 91, both hemispheres
654.9
2115
Male, age 80, left hemisphere
614.9
Pontine raphe nucleus nTPM: 834.5
2122
Female, age 85, midline
953.6
2853
Male, age 76, midline
715.4
Posteroventral cochlear nucleus nTPM: 716.1
2752
Female, age 85, both hemispheres
881.9
2341
Male, age 80, both hemispheres
721.1
2371
Male, age 61, both hemispheres
706.8
2135
Female, age 91, both hemispheres
653.8
2070
Male, age 76, both hemispheres
616.7
Principal sensory trigeminal nucleus nTPM: 727.3
2008
Male, age 80, left hemisphere
790.1
2158
Male, age 61, both hemispheres
771.9
2324
Male, age 76, both hemispheres
712.1
2367
Female, age 91, left hemisphere
635.0
Reticular pontine nucleus, caudal nTPM: 676.5
2092
Male, age 76, both hemispheres
725.0
2559
Male, age 74, both hemispheres
711.9
2332
Male, age 80, right hemisphere
641.0
2457
Female, age 91, both hemispheres
628.1
Reticular pontine nucleus, oral nTPM: 785.4
2361
Male, age 74, both hemispheres
942.6
2012
Female, age 85, both hemispheres
861.2
1939
Male, age 80, both hemispheres
839.9
2167
Male, age 76, both hemispheres
669.0
2366
Female, age 91, both hemispheres
614.4
Reticulotegmental nucleus nTPM: 680.5
2322
Female, age 91, both hemispheres
714.6
2325
Male, age 76, both hemispheres
706.8
2333
Male, age 80, both hemispheres
657.3
2452
Male, age 74, both hemispheres
643.3
Spinal trigeminal nucleus, oral nTPM: 708.3
2737
Female, age 85, both hemispheres
852.4
2164
Male, age 80, both hemispheres
736.5
1978
Male, age 76, both hemispheres
536.2
Subcoeruleus area nTPM: 699.9
1958
Male, age 80, both hemispheres
825.9
2323
Female, age 91, left hemisphere
790.4
2369
Female, age 85, left hemisphere
691.8
2451
Male, age 74, both hemispheres
614.6
2089
Male, age 76, left hemisphere
576.8
Superior olive nTPM: 766.2
2364
Male, age 74, right hemisphere
974.1
1875
Female, age 85, both hemispheres
973.8
2020
Male, age 76, both hemispheres
667.6
2329
Male, age 80, right hemisphere
632.6
2561
Female, age 91, both hemispheres
582.7
Ventral periolivary nuclei nTPM: 775.5
2130
Female, age 85, both hemispheres
1046.3
2165
Male, age 80, both hemispheres
813.6
2023
Male, age 76, both hemispheres
681.8
2794
Female, age 91, left hemisphere
560.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 730.5
2840
Female, age 85, both hemispheres
895.1
2449
Male, age 74, both hemispheres
812.4
2359
Male, age 61, both hemispheres
754.9
1959
Male, age 76, both hemispheres
678.6
2161
Male, age 80, both hemispheres
672.7
2456
Female, age 91, both hemispheres
569.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1581.0
Pig sample
Sample description
nTPM
Pons nTPM: 1581.1
Samples: 4
Max nTPM: 1739.1
Min nTPM: 1345.6
Sample A
Female
1739.1
Sample B
Female
1345.6
Sample C
Male
1600.0
Sample D
Male
1639.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
