HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:45.9 nTPM
HPA Brain:53.6 nTPM
GTEx:45.9 nTPM
FANTOM5:165.3 Scaled Tags Per Million
Pig:31.1 nTPM
Mouse:101.0 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029349
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.6
Sample id Sample description nTPM
Hippocampus
nTPM: 47.9
1898 Male, age 80, left hemisphere 64.6
2529 Female, age 94, left hemisphere 51.7
2621 Female, age 67, right hemisphere 45.1
1855 Male, age 76, left hemisphere 44.6
1911 Female, age 85, right hemisphere 44.0
2148 Female, age 91, left hemisphere 37.8
Dentate gyrus
nTPM: 49.1
2010 Male, age 76, both hemispheres 57.0
1927 Female, age 91, both hemispheres 53.0
2246 Female, age 85, both hemispheres 47.9
2530 Female, age 94, left hemisphere 47.6
2528 Male, age 74, both hemispheres 47.3
2531 Female, age 67, both hemispheres 42.0
Entorhinal gyrus
nTPM: 42.7
1938 Female, age 85, left hemisphere 54.9
2764 Male, age 80, right hemisphere 49.1
1787 Male, age 76, left hemisphere 45.5
2117 Female, age 91, right hemisphere 44.6
2686 Male, age 75, right hemisphere 33.0
2613 Female, age 94, left hemisphere 29.3
Hippocampus, CA1
nTPM: 53.6
2749 Male, age 80, left hemisphere 69.9
1873 Female, age 85, both hemispheres 58.7
2045 Male, age 76, both hemispheres 49.7
2527 Male, age 74, both hemispheres 48.3
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 52.1
1892 Male, age 76, both hemispheres 65.4
1963 Male, age 80, left hemisphere 57.9
2249 Male, age 74, both hemispheres 55.6
1940 Female, age 85, left hemisphere 48.2
2437 Female, age 94, left hemisphere 43.4
2113 Female, age 91, right hemisphere 42.2
Hippocampus, CA3
nTPM: 47.7
1867 Male, age 76, both hemispheres 55.9
2436 Male, age 74, both hemispheres 55.4
2137 Male, age 80, left hemisphere 55.2
1891 Female, age 85, both hemispheres 47.5
2620 Female, age 94, left hemisphere 38.1
2861 Female, age 67, both hemispheres 34.1
Parahippocampal cortex
nTPM: 44.8
1850 Male, age 80, both hemispheres 58.2
1933 Female, age 85, both hemispheres 52.1
1990 Female, age 91, right hemisphere 51.5
2018 Male, age 76, both hemispheres 48.4
2532 Female, age 72, left hemisphere 47.6
2250 Female, age 67, right hemisphere 47.3
2245 Female, age 91, both hemispheres 42.1
2693 Female, age 94, both hemispheres 35.8
2692 Male, age 74, both hemispheres 35.4
2622 Female, age 67, right hemisphere 29.8
Perirhinal gyrus
nTPM: 53.5
1841 Female, age 85, right hemisphere 62.9
1847 Female, age 91, left hemisphere 57.5
1794 Male, age 80, right hemisphere 57.4
2848 Male, age 76, right hemisphere 47.5
2521 Female, age 94, right hemisphere 42.3
Subiculum
nTPM: 47.0
1977 Female, age 85, both hemispheres 56.5
1901 Male, age 80, both hemispheres 53.4
2042 Male, age 76, both hemispheres 47.4
2438 Female, age 94, left hemisphere 45.6
2729 Female, age 91, right hemisphere 40.2
2619 Male, age 74, both hemispheres 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.9
Samples: 197

Max nTPM: 139.4
Min nTPM: 28.4
Std nTPM: 13.7
Median nTPM: 42.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 139.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 111.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 105.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 84.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 77.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 76.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 76.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 75.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 64.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 64.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 165.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 165.3
FF:10169-103B7 60 years, female 189.0
FF:10153-102I9 76 years, female 141.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.1
Pig sample Sample description nTPM
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 32.1
Min nTPM: 29.0
Sample A Female 32.1
Sample B Female 29.0
Sample C Male 29.0
Sample D Male 30.7
Dorsal hippocampus
nTPM: 31.1
Samples: 4

Max nTPM: 34.3
Min nTPM: 27.8
Sample A Female 34.3
Sample B Female 32.6
Sample C Male 29.7
Sample D Male 27.8
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 32.7
Min nTPM: 27.6
Sample A Female 29.6
Sample B Female 32.7
Sample C Male 27.6
Sample D Male 27.7
Ventral hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 32.5
Min nTPM: 27.1
Sample A Female 32.5
Sample B Female 27.1
Sample C Male 27.7
Sample D Male 29.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.9
Samples: 4

Max nTPM: 106.1
Min nTPM: 91.8
Sample A Male 91.8
Sample B Male 98.5
Sample C Female 106.1
Sample D Female 103.3
Hippocampal formation
nTPM: 101.1
Samples: 4

Max nTPM: 112.9
Min nTPM: 94.4
Sample A Male 112.9
Sample B Male 96.9
Sample C Female 100.0
Sample D Female 94.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
71380971 Antisense, RP_050426_02_A01, Mouse strain C57BL/6J (56 days, male) 13.2

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