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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
55.1
nTPM
GTEx:
55.1
nTPM
FANTOM5:
96.1
Scaled Tags Per Million
Pig:
29.4
nTPM
Mouse:
178.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
55.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 55.1
Samples: 105
Max nTPM: 92.3
Min nTPM: 36.3
Std nTPM: 10.6
Median nTPM: 0.0
491_1
89 years, female
92.3
490_1
67 years, female
85.6
99_1
64 years, male
80.0
162_1
79 years, female
76.3
120_1
70 years, female
74.2
119_1
70 years, female
72.7
414_1
84 years, female
72.3
89_1
63 years, male
72.1
415_1
77 years, female
71.0
347_1
72 years, male
69.8
42_1
85 years, male
69.6
413_1
59 years, female
68.1
109_1
81 years, female
66.7
308_1
70 years, female
66.3
307_1
66 years, female
65.7
117_1
61 years, male
65.6
466_1
57 years, female
64.5
379_1
60 years, male
64.4
126_1
63 years, male
64.3
266_1
85 years, male
64.2
495_1
57 years, female
64.2
115_1
83 years, male
64.1
32_1
67 years, male
63.9
149_1
88 years, male
63.8
317_1
60 years, male
63.7
447_1
81 years, male
63.1
315_1
62 years, female
61.8
355_1
70 years, female
61.8
142_1
61 years, female
61.7
526_1
61 years, male
60.9
324_1
76 years, male
60.5
43_1
64 years, female
60.0
375_1
74 years, female
59.8
9_1
66 years, female
59.2
139_1
64 years, female
59.1
153_1
70 years, female
58.9
246_1
77 years, male
58.9
35_1
74 years, female
58.8
229_1
69 years, female
58.3
499_1
55 years, female
57.8
81_1
67 years, male
57.6
6_1
73 years, female
56.7
384_1
83 years, male
56.7
265_1
87 years, male
56.1
189_1
76 years, male
56.0
311_1
78 years, male
56.0
404_1
82 years, female
55.3
2_1
77 years, female
55.2
41_1
94 years, female
55.2
173_1
67 years, male
55.2
386_1
76 years, male
55.0
17_1
71 years, male
54.6
468_1
89 years, male
54.2
145_1
84 years, male
53.9
389_1
86 years, female
53.8
217_1
76 years, male
53.4
18_1
88 years, male
52.9
254_1
77 years, female
52.7
237_1
82 years, male
52.2
352_1
62 years, male
51.5
501_1
88 years, male
51.2
243_1
75 years, male
51.0
313_1
79 years, female
50.8
377_1
82 years, female
50.7
518_1
75 years, female
50.0
425_1
59 years, female
49.5
137_1
83 years, male
49.4
452_1
88 years, female
48.6
480_1
63 years, male
48.6
4_1
88 years, female
48.4
177_1
74 years, male
48.1
286_1
68 years, female
48.1
356_1
87 years, female
48.1
349_1
83 years, male
47.5
354_1
81 years, female
47.4
348_1
84 years, male
46.9
350_1
84 years, female
46.9
396_1
62 years, male
46.9
321_1
62 years, female
46.8
322_1
76 years, male
46.4
394_1
75 years, female
46.3
405_1
91 years, male
46.0
376_1
75 years, female
45.9
314_1
67 years, male
45.8
318_1
68 years, male
45.7
335_1
73 years, female
45.6
292_1
71 years, male
45.0
251_1
78 years, male
44.9
288_1
66 years, female
44.9
517_1
88 years, male
44.5
319_1
81 years, male
44.4
503_1
68 years, male
44.2
316_1
62 years, male
43.9
353_1
82 years, female
43.7
172_1
72 years, female
43.2
291_1
76 years, male
43.1
293_1
68 years, female
42.6
351_1
91 years, male
41.5
264_1
73 years, female
40.6
506_1
65 years, male
40.3
218_1
71 years, female
40.1
295_1
61 years, female
38.4
320_1
89 years, female
38.2
406_1
79 years, male
38.1
163_1
78 years, male
36.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
