HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.4 nTPM
HPA Brain:27.3 nTPM
GTEx:19.4 nTPM
FANTOM5:78.6 Scaled Tags Per Million
Pig:63.3 nTPM
Mouse:97.3 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035274Antibody HPA035275Antibody CAB075758
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
1898 Male, age 80, left hemisphere 32.4
1855 Male, age 76, left hemisphere 26.5
2621 Female, age 67, right hemisphere 26.4
1911 Female, age 85, right hemisphere 24.9
2148 Female, age 91, left hemisphere 22.5
2529 Female, age 94, left hemisphere 21.5
Dentate gyrus
nTPM: 24.7
2528 Male, age 74, both hemispheres 28.0
2010 Male, age 76, both hemispheres 27.0
2246 Female, age 85, both hemispheres 26.5
1927 Female, age 91, both hemispheres 24.9
2530 Female, age 94, left hemisphere 20.9
2531 Female, age 67, both hemispheres 20.9
Entorhinal gyrus
nTPM: 25.8
1938 Female, age 85, left hemisphere 28.5
2117 Female, age 91, right hemisphere 28.3
1787 Male, age 76, left hemisphere 27.7
2764 Male, age 80, right hemisphere 26.0
2613 Female, age 94, left hemisphere 25.3
2686 Male, age 75, right hemisphere 18.9
Hippocampus, CA1
nTPM: 26.3
2749 Male, age 80, left hemisphere 32.6
1873 Female, age 85, both hemispheres 27.8
2045 Male, age 76, both hemispheres 25.0
2527 Male, age 74, both hemispheres 24.8
2082 Female, age 91, right hemisphere 21.4
Hippocampus, CA2
nTPM: 26.0
1892 Male, age 76, both hemispheres 32.2
2249 Male, age 74, both hemispheres 29.3
1963 Male, age 80, left hemisphere 25.5
1940 Female, age 85, left hemisphere 24.2
2437 Female, age 94, left hemisphere 23.7
2113 Female, age 91, right hemisphere 21.3
Hippocampus, CA3
nTPM: 26.7
2137 Male, age 80, left hemisphere 29.3
1867 Male, age 76, both hemispheres 28.9
1891 Female, age 85, both hemispheres 28.6
2436 Male, age 74, both hemispheres 28.3
2620 Female, age 94, left hemisphere 28.3
2861 Female, age 67, both hemispheres 16.9
Parahippocampal cortex
nTPM: 25.3
1850 Male, age 80, both hemispheres 30.8
1990 Female, age 91, right hemisphere 27.9
2532 Female, age 72, left hemisphere 26.7
1933 Female, age 85, both hemispheres 25.9
2245 Female, age 91, both hemispheres 25.2
2693 Female, age 94, both hemispheres 25.1
2250 Female, age 67, right hemisphere 25.0
2692 Male, age 74, both hemispheres 24.8
2018 Male, age 76, both hemispheres 21.6
2622 Female, age 67, right hemisphere 20.3
Perirhinal gyrus
nTPM: 27.3
1841 Female, age 85, right hemisphere 29.2
1794 Male, age 80, right hemisphere 28.2
1847 Female, age 91, left hemisphere 27.3
2848 Male, age 76, right hemisphere 26.4
2521 Female, age 94, right hemisphere 25.5
Subiculum
nTPM: 27.0
1977 Female, age 85, both hemispheres 31.3
1901 Male, age 80, both hemispheres 29.4
2042 Male, age 76, both hemispheres 26.9
2619 Male, age 74, both hemispheres 26.5
2438 Female, age 94, left hemisphere 24.6
2729 Female, age 91, right hemisphere 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 29.8
Min nTPM: 8.7
Std nTPM: 2.9
Median nTPM: 19.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 25.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 25.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 25.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 25.0
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 25.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 24.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 24.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 24.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.6
FF:10169-103B7 60 years, female 86.2
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.3
Pig sample Sample description nTPM
Subiculum
nTPM: 51.3
Samples: 4

Max nTPM: 63.0
Min nTPM: 43.9
Sample A Female 63.0
Sample B Female 43.9
Sample C Male 49.7
Sample D Male 48.5
Dorsal hippocampus
nTPM: 63.4
Samples: 4

Max nTPM: 78.5
Min nTPM: 50.4
Sample A Female 78.5
Sample B Female 63.1
Sample C Male 61.4
Sample D Male 50.4
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 56.8
Min nTPM: 40.7
Sample A Female 56.8
Sample B Female 46.8
Sample C Male 45.9
Sample D Male 40.7
Ventral hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 65.4
Min nTPM: 37.4
Sample A Female 56.0
Sample B Female 37.4
Sample C Male 61.2
Sample D Male 65.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 84.6
Samples: 4

Max nTPM: 93.6
Min nTPM: 78.0
Sample A Male 78.0
Sample B Male 81.8
Sample C Female 84.9
Sample D Female 93.6
Hippocampal formation
nTPM: 97.4
Samples: 4

Max nTPM: 100.6
Min nTPM: 90.7
Sample A Male 100.6
Sample B Male 98.2
Sample C Female 99.9
Sample D Female 90.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
69015823 Antisense, RP_050315_01_G06, Mouse strain C57BL/6J (56 days, male) 14.4

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