HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:535.1 nTPM
HPA Brain:562.3 nTPM
GTEx:535.1 nTPM
FANTOM5:180.5 Scaled Tags Per Million
Pig:768.3 nTPM
Mouse:1375.1 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068438Antibody CAB010107
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 562.3
Sample id Sample description nTPM
Hippocampus
nTPM: 193.5
1898 Male, age 80, left hemisphere 240.8
2621 Female, age 67, right hemisphere 222.0
1911 Female, age 85, right hemisphere 198.2
2529 Female, age 94, left hemisphere 195.7
1855 Male, age 76, left hemisphere 173.6
2148 Female, age 91, left hemisphere 130.5
Dentate gyrus
nTPM: 203.9
2530 Female, age 94, left hemisphere 281.6
2246 Female, age 85, both hemispheres 218.5
2531 Female, age 67, both hemispheres 209.9
2528 Male, age 74, both hemispheres 190.6
2010 Male, age 76, both hemispheres 189.3
1927 Female, age 91, both hemispheres 133.3
Entorhinal gyrus
nTPM: 394.8
2764 Male, age 80, right hemisphere 548.7
1938 Female, age 85, left hemisphere 472.7
2613 Female, age 94, left hemisphere 451.3
1787 Male, age 76, left hemisphere 405.6
2117 Female, age 91, right hemisphere 247.7
2686 Male, age 75, right hemisphere 242.7
Hippocampus, CA1
nTPM: 180.1
2045 Male, age 76, both hemispheres 195.6
2082 Female, age 91, right hemisphere 190.8
2527 Male, age 74, both hemispheres 179.2
2749 Male, age 80, left hemisphere 170.5
1873 Female, age 85, both hemispheres 164.4
Hippocampus, CA2
nTPM: 229.1
1940 Female, age 85, left hemisphere 326.3
2437 Female, age 94, left hemisphere 250.3
1892 Male, age 76, both hemispheres 223.4
2249 Male, age 74, both hemispheres 218.7
2113 Female, age 91, right hemisphere 195.0
1963 Male, age 80, left hemisphere 160.9
Hippocampus, CA3
nTPM: 179.2
1891 Female, age 85, both hemispheres 252.6
1867 Male, age 76, both hemispheres 232.3
2436 Male, age 74, both hemispheres 165.0
2137 Male, age 80, left hemisphere 152.8
2620 Female, age 94, left hemisphere 150.5
2861 Female, age 67, both hemispheres 122.2
Parahippocampal cortex
nTPM: 408.2
1850 Male, age 80, both hemispheres 666.8
2532 Female, age 72, left hemisphere 627.3
1933 Female, age 85, both hemispheres 510.3
2245 Female, age 91, both hemispheres 378.5
2693 Female, age 94, both hemispheres 373.8
1990 Female, age 91, right hemisphere 364.4
2018 Male, age 76, both hemispheres 320.1
2250 Female, age 67, right hemisphere 309.2
2622 Female, age 67, right hemisphere 295.3
2692 Male, age 74, both hemispheres 236.6
Perirhinal gyrus
nTPM: 562.3
1841 Female, age 85, right hemisphere 666.1
1794 Male, age 80, right hemisphere 644.5
2848 Male, age 76, right hemisphere 561.0
1847 Female, age 91, left hemisphere 474.9
2521 Female, age 94, right hemisphere 465.2
Subiculum
nTPM: 282.3
1977 Female, age 85, both hemispheres 412.0
2438 Female, age 94, left hemisphere 312.0
2042 Male, age 76, both hemispheres 289.9
1901 Male, age 80, both hemispheres 264.4
2619 Male, age 74, both hemispheres 262.8
2729 Female, age 91, right hemisphere 152.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 535.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 535.1
Samples: 197

Max nTPM: 1753.3
Min nTPM: 180.6
Std nTPM: 238.5
Median nTPM: 476.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1753.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 1495.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 1190.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1150.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1148.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 1136.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1075.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 999.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 977.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 965.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 965.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.5
FF:10169-103B7 60 years, female 239.9
FF:10153-102I9 76 years, female 121.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 768.3
Pig sample Sample description nTPM
Subiculum
nTPM: 768.3
Samples: 4

Max nTPM: 961.7
Min nTPM: 638.3
Sample A Female 961.7
Sample B Female 764.9
Sample C Male 638.3
Sample D Male 708.4
Dorsal hippocampus
nTPM: 525.9
Samples: 4

Max nTPM: 738.9
Min nTPM: 309.8
Sample A Female 738.9
Sample B Female 471.6
Sample C Male 583.2
Sample D Male 309.8
Entorhinal cortex
nTPM: 696.7
Samples: 4

Max nTPM: 761.9
Min nTPM: 639.7
Sample A Female 677.6
Sample B Female 707.5
Sample C Male 761.9
Sample D Male 639.7
Ventral hippocampus
nTPM: 471.8
Samples: 4

Max nTPM: 559.5
Min nTPM: 424.5
Sample A Female 462.8
Sample B Female 424.5
Sample C Male 559.5
Sample D Male 440.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1375.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1375.1
Samples: 4

Max nTPM: 1566.2
Min nTPM: 1196.9
Sample A Male 1345.5
Sample B Male 1566.2
Sample C Female 1196.9
Sample D Female 1391.8
Hippocampal formation
nTPM: 658.9
Samples: 4

Max nTPM: 884.3
Min nTPM: 538.1
Sample A Male 884.3
Sample B Male 538.1
Sample C Female 571.0
Sample D Female 642.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 10.3
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 7.8

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