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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
529.8
nTPM
FANTOM5:
336.4
Scaled Tags Per Million
Pig:
798.0
nTPM
Allen mouse:
6.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
529.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 479.2
2188
Female, age 91, both hemispheres
634.8
2301
Female, age 85, both hemispheres
599.9
2090
Male, age 80, both hemispheres
443.7
1984
Male, age 76, both hemispheres
238.5
Dorsal cochlear nucleus nTPM: 339.9
2187
Female, age 91, both hemispheres
567.4
2802
Male, age 74, right hemisphere
346.0
2378
Male, age 80, both hemispheres
296.2
2058
Male, age 76, both hemispheres
267.1
2370
Male, age 61, both hemispheres
222.5
Dorsal tegmental nucleus nTPM: 337.0
2326
Male, age 74, both hemispheres
423.6
2083
Male, age 80, both hemispheres
390.8
1936
Male, age 76, left hemisphere
293.5
2358
Male, age 61, both hemispheres
239.9
Dorsolateral tegmental area nTPM: 349.2
2751
Female, age 85, both hemispheres
509.3
2654
Male, age 80, both hemispheres
356.1
2337
Male, age 61, both hemispheres
305.6
2141
Male, age 76, both hemispheres
289.3
2360
Male, age 74, both hemispheres
285.6
Kolliker-Fuse nucleus nTPM: 410.4
2793
Female, age 91, left hemisphere
668.9
2163
Male, age 80, both hemispheres
288.1
2315
Male, age 76, right hemisphere
274.3
Lateral lemniscal nuclei nTPM: 416.2
2320
Female, age 91, left hemisphere
517.6
2746
Female, age 85, left hemisphere
423.9
2453
Male, age 74, right hemisphere
414.8
2036
Male, age 80, both hemispheres
362.8
2169
Male, age 76, both hemispheres
362.0
Lateral parabrachial nucleus nTPM: 364.2
2792
Male, age 76, both hemispheres
549.9
2013
Male, age 80, both hemispheres
348.5
2139
Female, age 85, right hemisphere
321.7
2790
Male, age 61, both hemispheres
236.7
Lateral vestibular nucleus nTPM: 317.6
2311
Male, age 80, both hemispheres
366.3
2184
Male, age 76, both hemispheres
269.0
Locus coeruleus nTPM: 380.7
2014
Male, age 55, unknown
485.6
2720
Male, age 74, both hemispheres
440.0
2788
Male, age 74, unknown
399.2
2123
Female, age 91, both hemispheres
388.8
2162
Male, age 80, both hemispheres
347.2
1980
Male, age 76, both hemispheres
326.2
2317
Female, age 72, unknown
277.9
Medial parabrachial nucleus nTPM: 412.9
2170
Female, age 91, both hemispheres
632.0
2854
Male, age 80, both hemispheres
471.6
2463
Female, age 85, right hemisphere
396.2
2786
Male, age 76, both hemispheres
341.6
2156
Male, age 61, both hemispheres
223.3
Medial periolivary nuclei nTPM: 432.4
2791
Male, age 74, right hemisphere
612.6
2458
Female, age 91, both hemispheres
472.7
2081
Male, age 80, both hemispheres
407.7
2063
Male, age 76, both hemispheres
360.6
2171
Female, age 85, both hemispheres
308.4
Motor facial nucleus nTPM: 417.3
2365
Male, age 74, right hemisphere
607.1
2697
Female, age 85, both hemispheres
473.2
2126
Male, age 61, both hemispheres
435.7
2062
Male, age 76, both hemispheres
336.9
2327
Male, age 80, both hemispheres
329.8
2795
Female, age 91, both hemispheres
321.1
Motor trigeminal nucleus nTPM: 386.7
2560
Male, age 74, both hemispheres
528.8
2321
Female, age 91, both hemispheres
482.0
2079
Male, age 80, both hemispheres
330.8
2309
Male, age 76, both hemispheres
312.9
2335
Male, age 61, both hemispheres
279.1
Nuclei of the trapezoid body nTPM: 381.6
2159
Male, age 61, both hemispheres
440.8
2166
Male, age 80, both hemispheres
405.7
2368
Female, age 91, both hemispheres
397.6
1983
Male, age 76, both hemispheres
368.2
2735
Female, age 85, both hemispheres
295.9
Nucleus raphe magnus nTPM: 382.8
2455
Male, age 74, both hemispheres
450.7
2459
Female, age 91, both hemispheres
433.4
2051
Male, age 76, both hemispheres
405.3
2328
Male, age 80, both hemispheres
363.3
2160
Male, age 61, both hemispheres
354.5
2172
Female, age 85, both hemispheres
289.4
Paramedian reticular nucleus nTPM: 395.8
2050
Female, age 85, both hemispheres
461.2
2052
Male, age 76, both hemispheres
425.7
2313
Male, age 61, both hemispheres
349.4
2057
Male, age 80, both hemispheres
346.8
Pedunculopontine tegmental nucleus nTPM: 355.3
2334
Male, age 80, both hemispheres
380.3
2338
Male, age 61, both hemispheres
356.9
1921
Female, age 85, both hemispheres
328.8
Pontine nuclei nTPM: 466.7
2454
Male, age 74, left hemisphere
884.9
2319
Female, age 91, both hemispheres
596.2
2109
Female, age 72, unknown
449.0
1863
Male, age 55, unknown
428.4
1968
Male, age 76, left hemisphere
377.1
2727
Male, age 61, right hemisphere
362.3
2115
Male, age 80, left hemisphere
347.8
2787
Female, age 85, both hemispheres
287.6
Pontine raphe nucleus nTPM: 361.0
2853
Male, age 76, midline
382.3
2122
Female, age 85, midline
339.6
Posteroventral cochlear nucleus nTPM: 412.2
2135
Female, age 91, both hemispheres
676.3
2341
Male, age 80, both hemispheres
469.3
2070
Male, age 76, both hemispheres
355.8
2752
Female, age 85, both hemispheres
315.0
2371
Male, age 61, both hemispheres
244.6
Principal sensory trigeminal nucleus nTPM: 390.5
2367
Female, age 91, left hemisphere
607.9
2158
Male, age 61, both hemispheres
348.0
2008
Male, age 80, left hemisphere
340.2
2324
Male, age 76, both hemispheres
265.9
Reticular pontine nucleus, caudal nTPM: 473.7
2559
Male, age 74, both hemispheres
650.9
2457
Female, age 91, both hemispheres
533.6
2092
Male, age 76, both hemispheres
393.7
2332
Male, age 80, right hemisphere
316.5
Reticular pontine nucleus, oral nTPM: 529.8
2361
Male, age 74, both hemispheres
835.1
2366
Female, age 91, both hemispheres
598.5
2012
Female, age 85, both hemispheres
414.9
1939
Male, age 80, both hemispheres
408.2
2167
Male, age 76, both hemispheres
392.2
Reticulotegmental nucleus nTPM: 352.2
2322
Female, age 91, both hemispheres
428.5
2452
Male, age 74, both hemispheres
373.0
2333
Male, age 80, both hemispheres
314.3
2325
Male, age 76, both hemispheres
293.1
Spinal trigeminal nucleus, oral nTPM: 294.5
1978
Male, age 76, both hemispheres
321.2
2164
Male, age 80, both hemispheres
303.1
2737
Female, age 85, both hemispheres
259.1
Subcoeruleus area nTPM: 371.8
2369
Female, age 85, left hemisphere
550.2
1958
Male, age 80, both hemispheres
384.3
2089
Male, age 76, left hemisphere
338.8
2323
Female, age 91, left hemisphere
326.8
2451
Male, age 74, both hemispheres
258.6
Superior olive nTPM: 465.2
2364
Male, age 74, right hemisphere
638.7
2020
Male, age 76, both hemispheres
457.7
2561
Female, age 91, both hemispheres
424.3
2329
Male, age 80, right hemisphere
411.2
1875
Female, age 85, both hemispheres
394.3
Ventral periolivary nuclei nTPM: 385.4
2023
Male, age 76, both hemispheres
474.7
2165
Male, age 80, both hemispheres
372.6
2130
Female, age 85, both hemispheres
348.4
2794
Female, age 91, left hemisphere
345.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 415.1
2449
Male, age 74, both hemispheres
511.2
2840
Female, age 85, both hemispheres
477.9
2456
Female, age 91, both hemispheres
404.9
1959
Male, age 76, both hemispheres
391.4
2161
Male, age 80, both hemispheres
360.2
2359
Male, age 61, both hemispheres
345.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
798.0
Pig sample
Sample description
nTPM
Pons nTPM: 798.0
Samples: 4
Max nTPM: 901.0
Min nTPM: 633.2
Sample A
Female
901.0
Sample B
Female
633.2
Sample C
Male
856.8
Sample D
Male
801.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
