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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
130.9
nTPM
FANTOM5:
181.9
Scaled Tags Per Million
Pig:
69.1
nTPM
Allen mouse:
2.3
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
130.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 127.7
1984
Male, age 76, both hemispheres
137.7
2090
Male, age 80, both hemispheres
133.9
2301
Female, age 85, both hemispheres
128.2
2188
Female, age 91, both hemispheres
111.1
Dorsal cochlear nucleus nTPM: 106.5
2378
Male, age 80, both hemispheres
141.1
2802
Male, age 74, right hemisphere
139.7
2370
Male, age 61, both hemispheres
92.0
2187
Female, age 91, both hemispheres
86.7
2058
Male, age 76, both hemispheres
72.7
Dorsal tegmental nucleus nTPM: 101.0
2358
Male, age 61, both hemispheres
120.1
2083
Male, age 80, both hemispheres
100.1
2326
Male, age 74, both hemispheres
99.4
1936
Male, age 76, left hemisphere
84.2
Dorsolateral tegmental area nTPM: 130.9
2337
Male, age 61, both hemispheres
236.8
2360
Male, age 74, both hemispheres
156.9
2751
Female, age 85, both hemispheres
101.9
2654
Male, age 80, both hemispheres
92.2
2141
Male, age 76, both hemispheres
66.8
Kolliker-Fuse nucleus nTPM: 85.5
2315
Male, age 76, right hemisphere
94.7
2163
Male, age 80, both hemispheres
85.5
2793
Female, age 91, left hemisphere
76.4
Lateral lemniscal nuclei nTPM: 69.6
2746
Female, age 85, left hemisphere
91.9
2453
Male, age 74, right hemisphere
79.9
2320
Female, age 91, left hemisphere
73.4
2036
Male, age 80, both hemispheres
70.4
2169
Male, age 76, both hemispheres
32.5
Lateral parabrachial nucleus nTPM: 102.3
2139
Female, age 85, right hemisphere
142.1
2013
Male, age 80, both hemispheres
97.9
2790
Male, age 61, both hemispheres
95.2
2792
Male, age 76, both hemispheres
73.9
Lateral vestibular nucleus nTPM: 86.0
2311
Male, age 80, both hemispheres
106.0
2184
Male, age 76, both hemispheres
66.1
Locus coeruleus nTPM: 74.8
2123
Female, age 91, both hemispheres
154.2
2317
Female, age 72, unknown
72.5
1980
Male, age 76, both hemispheres
68.4
2720
Male, age 74, both hemispheres
64.7
2162
Male, age 80, both hemispheres
64.4
2014
Male, age 55, unknown
53.5
2788
Male, age 74, unknown
45.7
Medial parabrachial nucleus nTPM: 89.0
2463
Female, age 85, right hemisphere
116.9
2170
Female, age 91, both hemispheres
104.2
2156
Male, age 61, both hemispheres
95.5
2854
Male, age 80, both hemispheres
70.2
2786
Male, age 76, both hemispheres
58.2
Medial periolivary nuclei nTPM: 83.2
2791
Male, age 74, right hemisphere
112.9
2081
Male, age 80, both hemispheres
106.7
2171
Female, age 85, both hemispheres
89.9
2458
Female, age 91, both hemispheres
65.4
2063
Male, age 76, both hemispheres
41.4
Motor facial nucleus nTPM: 81.0
2126
Male, age 61, both hemispheres
105.2
2365
Male, age 74, right hemisphere
101.7
2795
Female, age 91, both hemispheres
101.3
2697
Female, age 85, both hemispheres
77.6
2327
Male, age 80, both hemispheres
62.6
2062
Male, age 76, both hemispheres
37.7
Motor trigeminal nucleus nTPM: 94.3
2335
Male, age 61, both hemispheres
155.0
2560
Male, age 74, both hemispheres
92.5
2079
Male, age 80, both hemispheres
85.6
2321
Female, age 91, both hemispheres
84.0
2309
Male, age 76, both hemispheres
54.5
Nuclei of the trapezoid body nTPM: 69.5
2735
Female, age 85, both hemispheres
80.7
2159
Male, age 61, both hemispheres
80.3
2166
Male, age 80, both hemispheres
73.4
2368
Female, age 91, both hemispheres
66.5
1983
Male, age 76, both hemispheres
46.5
Nucleus raphe magnus nTPM: 69.1
2459
Female, age 91, both hemispheres
83.1
2455
Male, age 74, both hemispheres
82.3
2172
Female, age 85, both hemispheres
78.1
2328
Male, age 80, both hemispheres
73.1
2051
Male, age 76, both hemispheres
53.1
2160
Male, age 61, both hemispheres
44.8
Paramedian reticular nucleus nTPM: 83.0
2313
Male, age 61, both hemispheres
93.2
2050
Female, age 85, both hemispheres
88.9
2057
Male, age 80, both hemispheres
82.5
2052
Male, age 76, both hemispheres
67.3
Pedunculopontine tegmental nucleus nTPM: 81.6
2338
Male, age 61, both hemispheres
124.7
2334
Male, age 80, both hemispheres
71.8
1921
Female, age 85, both hemispheres
48.4
Pontine nuclei nTPM: 77.2
2787
Female, age 85, both hemispheres
95.5
2115
Male, age 80, left hemisphere
93.6
2109
Female, age 72, unknown
91.3
2319
Female, age 91, both hemispheres
88.3
1863
Male, age 55, unknown
85.6
2454
Male, age 74, left hemisphere
79.1
2727
Male, age 61, right hemisphere
46.4
1968
Male, age 76, left hemisphere
38.2
Pontine raphe nucleus nTPM: 62.1
2122
Female, age 85, midline
73.6
2853
Male, age 76, midline
50.5
Posteroventral cochlear nucleus nTPM: 113.2
2371
Male, age 61, both hemispheres
151.7
2135
Female, age 91, both hemispheres
140.7
2341
Male, age 80, both hemispheres
106.8
2070
Male, age 76, both hemispheres
104.8
2752
Female, age 85, both hemispheres
61.9
Principal sensory trigeminal nucleus nTPM: 64.2
2008
Male, age 80, left hemisphere
71.1
2367
Female, age 91, left hemisphere
68.9
2324
Male, age 76, both hemispheres
61.9
2158
Male, age 61, both hemispheres
54.7
Reticular pontine nucleus, caudal nTPM: 72.4
2559
Male, age 74, both hemispheres
91.4
2332
Male, age 80, right hemisphere
81.5
2457
Female, age 91, both hemispheres
66.0
2092
Male, age 76, both hemispheres
50.7
Reticular pontine nucleus, oral nTPM: 70.1
1939
Male, age 80, both hemispheres
90.0
2012
Female, age 85, both hemispheres
71.1
2361
Male, age 74, both hemispheres
70.9
2366
Female, age 91, both hemispheres
65.8
2167
Male, age 76, both hemispheres
52.7
Reticulotegmental nucleus nTPM: 87.4
2333
Male, age 80, both hemispheres
112.4
2452
Male, age 74, both hemispheres
109.4
2322
Female, age 91, both hemispheres
79.2
2325
Male, age 76, both hemispheres
48.6
Spinal trigeminal nucleus, oral nTPM: 81.6
2164
Male, age 80, both hemispheres
92.0
2737
Female, age 85, both hemispheres
81.9
1978
Male, age 76, both hemispheres
70.9
Subcoeruleus area nTPM: 72.6
2369
Female, age 85, left hemisphere
96.9
2451
Male, age 74, both hemispheres
91.3
1958
Male, age 80, both hemispheres
70.4
2323
Female, age 91, left hemisphere
62.4
2089
Male, age 76, left hemisphere
42.0
Superior olive nTPM: 77.3
2364
Male, age 74, right hemisphere
124.9
1875
Female, age 85, both hemispheres
76.3
2561
Female, age 91, both hemispheres
71.5
2329
Male, age 80, right hemisphere
70.1
2020
Male, age 76, both hemispheres
44.0
Ventral periolivary nuclei nTPM: 69.4
2130
Female, age 85, both hemispheres
95.4
2165
Male, age 80, both hemispheres
69.8
2794
Female, age 91, left hemisphere
64.6
2023
Male, age 76, both hemispheres
47.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 85.3
2359
Male, age 61, both hemispheres
142.2
2161
Male, age 80, both hemispheres
89.4
2449
Male, age 74, both hemispheres
82.4
2456
Female, age 91, both hemispheres
81.1
2840
Female, age 85, both hemispheres
71.9
1959
Male, age 76, both hemispheres
44.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
69.1
Pig sample
Sample description
nTPM
Pons nTPM: 69.1
Samples: 4
Max nTPM: 142.4
Min nTPM: 22.2
Sample A
Female
142.4
Sample B
Female
22.2
Sample C
Male
49.4
Sample D
Male
62.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
