HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:120.4 nTPM
HPA Brain:85.2 nTPM
GTEx:120.4 nTPM
FANTOM5:254.9 Scaled Tags Per Million
Pig:134.7 nTPM
Mouse:109.0 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043175
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.2
Sample id Sample description nTPM
Hippocampus
nTPM: 66.7
1898 Male, age 80, left hemisphere 101.9
1855 Male, age 76, left hemisphere 66.6
2529 Female, age 94, left hemisphere 64.0
2621 Female, age 67, right hemisphere 61.3
1911 Female, age 85, right hemisphere 56.8
2148 Female, age 91, left hemisphere 49.6
Dentate gyrus
nTPM: 62.6
1927 Female, age 91, both hemispheres 89.7
2010 Male, age 76, both hemispheres 70.7
2246 Female, age 85, both hemispheres 63.5
2530 Female, age 94, left hemisphere 59.2
2528 Male, age 74, both hemispheres 52.0
2531 Female, age 67, both hemispheres 40.6
Entorhinal gyrus
nTPM: 56.2
1938 Female, age 85, left hemisphere 79.2
2764 Male, age 80, right hemisphere 65.2
1787 Male, age 76, left hemisphere 57.9
2613 Female, age 94, left hemisphere 47.8
2686 Male, age 75, right hemisphere 44.2
2117 Female, age 91, right hemisphere 43.1
Hippocampus, CA1
nTPM: 82.8
2749 Male, age 80, left hemisphere 149.5
1873 Female, age 85, both hemispheres 85.6
2527 Male, age 74, both hemispheres 80.6
2045 Male, age 76, both hemispheres 55.1
2082 Female, age 91, right hemisphere 42.9
Hippocampus, CA2
nTPM: 71.7
1963 Male, age 80, left hemisphere 99.7
1892 Male, age 76, both hemispheres 97.8
2249 Male, age 74, both hemispheres 70.5
1940 Female, age 85, left hemisphere 58.4
2437 Female, age 94, left hemisphere 54.2
2113 Female, age 91, right hemisphere 49.8
Hippocampus, CA3
nTPM: 74.6
2137 Male, age 80, left hemisphere 122.2
2436 Male, age 74, both hemispheres 105.6
1867 Male, age 76, both hemispheres 82.3
1891 Female, age 85, both hemispheres 61.9
2861 Female, age 67, both hemispheres 43.0
2620 Female, age 94, left hemisphere 32.5
Parahippocampal cortex
nTPM: 68.1
1850 Male, age 80, both hemispheres 102.5
2250 Female, age 67, right hemisphere 77.7
1933 Female, age 85, both hemispheres 77.2
1990 Female, age 91, right hemisphere 75.5
2245 Female, age 91, both hemispheres 74.9
2018 Male, age 76, both hemispheres 62.8
2693 Female, age 94, both hemispheres 62.3
2532 Female, age 72, left hemisphere 58.5
2692 Male, age 74, both hemispheres 47.7
2622 Female, age 67, right hemisphere 41.9
Perirhinal gyrus
nTPM: 85.2
1847 Female, age 91, left hemisphere 116.0
1841 Female, age 85, right hemisphere 93.8
1794 Male, age 80, right hemisphere 85.0
2521 Female, age 94, right hemisphere 68.5
2848 Male, age 76, right hemisphere 62.5
Subiculum
nTPM: 59.9
1901 Male, age 80, both hemispheres 84.4
1977 Female, age 85, both hemispheres 71.0
2438 Female, age 94, left hemisphere 64.5
2619 Male, age 74, both hemispheres 50.6
2042 Male, age 76, both hemispheres 50.1
2729 Female, age 91, right hemisphere 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 120.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.4
Samples: 197

Max nTPM: 425.1
Min nTPM: 44.7
Std nTPM: 50.5
Median nTPM: 113.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 425.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 286.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 246.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 245.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 223.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 221.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 218.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 217.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 213.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 212.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 209.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 254.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 254.9
FF:10169-103B7 60 years, female 382.1
FF:10153-102I9 76 years, female 127.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 134.7
Pig sample Sample description nTPM
Subiculum
nTPM: 118.8
Samples: 4

Max nTPM: 132.5
Min nTPM: 110.0
Sample A Female 115.1
Sample B Female 110.0
Sample C Male 117.7
Sample D Male 132.5
Dorsal hippocampus
nTPM: 120.2
Samples: 4

Max nTPM: 134.1
Min nTPM: 104.5
Sample A Female 117.4
Sample B Female 124.8
Sample C Male 134.1
Sample D Male 104.5
Entorhinal cortex
nTPM: 134.7
Samples: 4

Max nTPM: 163.3
Min nTPM: 116.1
Sample A Female 116.1
Sample B Female 163.3
Sample C Male 130.7
Sample D Male 128.8
Ventral hippocampus
nTPM: 105.2
Samples: 4

Max nTPM: 114.4
Min nTPM: 96.3
Sample A Female 114.4
Sample B Female 96.9
Sample C Male 96.3
Sample D Male 113.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.8
Samples: 4

Max nTPM: 111.0
Min nTPM: 83.6
Sample A Male 111.0
Sample B Male 83.6
Sample C Female 89.3
Sample D Female 91.1
Hippocampal formation
nTPM: 109.1
Samples: 4

Max nTPM: 123.2
Min nTPM: 97.8
Sample A Male 123.2
Sample B Male 103.4
Sample C Female 111.8
Sample D Female 97.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
68522460 Antisense, RP_050118_02_A12, Mouse strain C57BL/6J (56 days, male) 13.2

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