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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
123.2
nTPM
GTEx:
123.2
nTPM
FANTOM5:
66.9
Scaled Tags Per Million
Pig:
74.7
nTPM
Mouse:
121.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
123.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 123.2
Samples: 105
Max nTPM: 215.9
Min nTPM: 50.6
Std nTPM: 37.0
Median nTPM:
162_1
79 years, female
215.9
149_1
88 years, male
213.1
32_1
67 years, male
193.1
491_1
89 years, female
191.0
89_1
63 years, male
188.3
81_1
67 years, male
186.9
490_1
67 years, female
185.6
142_1
61 years, female
184.1
126_1
63 years, male
183.9
43_1
64 years, female
179.4
466_1
57 years, female
176.8
139_1
64 years, female
174.4
35_1
74 years, female
172.0
415_1
77 years, female
171.8
495_1
57 years, female
170.5
17_1
71 years, male
169.5
4_1
88 years, female
168.9
153_1
70 years, female
166.1
501_1
88 years, male
162.0
518_1
75 years, female
160.6
2_1
77 years, female
160.0
120_1
70 years, female
158.6
315_1
62 years, female
158.6
117_1
61 years, male
158.3
9_1
66 years, female
157.5
18_1
88 years, male
155.2
6_1
73 years, female
150.9
119_1
70 years, female
150.6
217_1
76 years, male
148.0
413_1
59 years, female
143.6
109_1
81 years, female
142.2
115_1
83 years, male
141.9
137_1
83 years, male
141.3
499_1
55 years, female
140.3
324_1
76 years, male
139.9
42_1
85 years, male
136.4
468_1
89 years, male
136.2
288_1
66 years, female
133.6
311_1
78 years, male
133.6
348_1
84 years, male
129.5
313_1
79 years, female
128.6
99_1
64 years, male
128.3
447_1
81 years, male
128.0
265_1
87 years, male
125.8
254_1
77 years, female
124.9
251_1
78 years, male
124.5
322_1
76 years, male
124.2
41_1
94 years, female
123.8
314_1
67 years, male
123.5
517_1
88 years, male
120.8
307_1
66 years, female
118.7
246_1
77 years, male
118.6
396_1
62 years, male
118.5
526_1
61 years, male
114.9
414_1
84 years, female
114.5
386_1
76 years, male
114.0
291_1
76 years, male
113.4
503_1
68 years, male
113.4
320_1
89 years, female
112.4
266_1
85 years, male
112.0
480_1
63 years, male
109.1
308_1
70 years, female
107.4
377_1
82 years, female
106.7
335_1
73 years, female
105.9
229_1
69 years, female
104.7
375_1
74 years, female
103.0
354_1
81 years, female
102.9
316_1
62 years, male
102.7
286_1
68 years, female
101.9
292_1
71 years, male
101.9
389_1
86 years, female
99.2
405_1
91 years, male
98.2
384_1
83 years, male
97.0
319_1
81 years, male
95.7
352_1
62 years, male
95.4
425_1
59 years, female
94.2
237_1
82 years, male
94.1
506_1
65 years, male
94.0
243_1
75 years, male
93.6
404_1
82 years, female
93.4
293_1
68 years, female
90.7
347_1
72 years, male
90.6
379_1
60 years, male
90.5
355_1
70 years, female
89.9
321_1
62 years, female
88.8
189_1
76 years, male
87.0
351_1
91 years, male
87.0
350_1
84 years, female
86.3
264_1
73 years, female
86.1
295_1
61 years, female
85.9
406_1
79 years, male
85.5
356_1
87 years, female
85.2
452_1
88 years, female
84.4
173_1
67 years, male
83.6
353_1
82 years, female
82.6
376_1
75 years, female
80.5
145_1
84 years, male
80.0
349_1
83 years, male
78.5
394_1
75 years, female
78.1
317_1
60 years, male
76.2
318_1
68 years, male
70.7
172_1
72 years, female
69.5
177_1
74 years, male
62.7
218_1
71 years, female
52.2
163_1
78 years, male
50.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
