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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
127.6
nTPM
FANTOM5:
390.6
Scaled Tags Per Million
Pig:
227.4
nTPM
Allen mouse:
8.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
127.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 58.2
2301
Female, age 85, both hemispheres
66.6
2188
Female, age 91, both hemispheres
62.9
1984
Male, age 76, both hemispheres
59.4
2090
Male, age 80, both hemispheres
44.0
Dorsal cochlear nucleus nTPM: 74.2
2802
Male, age 74, right hemisphere
129.1
2187
Female, age 91, both hemispheres
69.6
2370
Male, age 61, both hemispheres
65.6
2058
Male, age 76, both hemispheres
58.4
2378
Male, age 80, both hemispheres
48.5
Dorsal tegmental nucleus nTPM: 70.3
2326
Male, age 74, both hemispheres
88.9
1936
Male, age 76, left hemisphere
73.0
2083
Male, age 80, both hemispheres
68.9
2358
Male, age 61, both hemispheres
50.3
Dorsolateral tegmental area nTPM: 67.2
2360
Male, age 74, both hemispheres
86.2
2751
Female, age 85, both hemispheres
76.5
2654
Male, age 80, both hemispheres
72.2
2141
Male, age 76, both hemispheres
65.6
2337
Male, age 61, both hemispheres
35.7
Kolliker-Fuse nucleus nTPM: 80.0
2163
Male, age 80, both hemispheres
96.5
2315
Male, age 76, right hemisphere
71.8
2793
Female, age 91, left hemisphere
71.7
Lateral lemniscal nuclei nTPM: 118.5
2169
Male, age 76, both hemispheres
165.5
2036
Male, age 80, both hemispheres
147.6
2453
Male, age 74, right hemisphere
105.1
2746
Female, age 85, left hemisphere
102.4
2320
Female, age 91, left hemisphere
72.1
Lateral parabrachial nucleus nTPM: 82.3
2139
Female, age 85, right hemisphere
126.3
2013
Male, age 80, both hemispheres
82.3
2790
Male, age 61, both hemispheres
67.9
2792
Male, age 76, both hemispheres
52.5
Lateral vestibular nucleus nTPM: 76.5
2184
Male, age 76, both hemispheres
91.0
2311
Male, age 80, both hemispheres
62.0
Locus coeruleus nTPM: 100.6
2720
Male, age 74, both hemispheres
143.6
2014
Male, age 55, unknown
106.4
2788
Male, age 74, unknown
102.1
2123
Female, age 91, both hemispheres
101.7
2317
Female, age 72, unknown
88.3
1980
Male, age 76, both hemispheres
83.9
2162
Male, age 80, both hemispheres
77.8
Medial parabrachial nucleus nTPM: 75.6
2854
Male, age 80, both hemispheres
99.8
2170
Female, age 91, both hemispheres
80.9
2786
Male, age 76, both hemispheres
77.7
2156
Male, age 61, both hemispheres
66.2
2463
Female, age 85, right hemisphere
53.2
Medial periolivary nuclei nTPM: 103.4
2063
Male, age 76, both hemispheres
150.9
2171
Female, age 85, both hemispheres
143.1
2791
Male, age 74, right hemisphere
104.8
2458
Female, age 91, both hemispheres
60.0
2081
Male, age 80, both hemispheres
58.3
Motor facial nucleus nTPM: 99.8
2062
Male, age 76, both hemispheres
155.5
2365
Male, age 74, right hemisphere
105.1
2327
Male, age 80, both hemispheres
96.9
2697
Female, age 85, both hemispheres
91.2
2795
Female, age 91, both hemispheres
82.3
2126
Male, age 61, both hemispheres
67.7
Motor trigeminal nucleus nTPM: 80.5
2079
Male, age 80, both hemispheres
104.7
2560
Male, age 74, both hemispheres
91.1
2309
Male, age 76, both hemispheres
83.0
2335
Male, age 61, both hemispheres
64.4
2321
Female, age 91, both hemispheres
59.4
Nuclei of the trapezoid body nTPM: 126.3
2159
Male, age 61, both hemispheres
174.7
1983
Male, age 76, both hemispheres
146.0
2735
Female, age 85, both hemispheres
144.3
2166
Male, age 80, both hemispheres
94.4
2368
Female, age 91, both hemispheres
71.9
Nucleus raphe magnus nTPM: 126.2
2160
Male, age 61, both hemispheres
187.9
2455
Male, age 74, both hemispheres
142.5
2172
Female, age 85, both hemispheres
139.9
2051
Male, age 76, both hemispheres
114.6
2328
Male, age 80, both hemispheres
102.3
2459
Female, age 91, both hemispheres
69.8
Paramedian reticular nucleus nTPM: 88.8
2050
Female, age 85, both hemispheres
154.9
2313
Male, age 61, both hemispheres
75.5
2057
Male, age 80, both hemispheres
67.1
2052
Male, age 76, both hemispheres
57.7
Pedunculopontine tegmental nucleus nTPM: 84.3
1921
Female, age 85, both hemispheres
109.7
2338
Male, age 61, both hemispheres
79.7
2334
Male, age 80, both hemispheres
63.5
Pontine nuclei nTPM: 127.6
1863
Male, age 55, unknown
211.2
2727
Male, age 61, right hemisphere
167.8
2787
Female, age 85, both hemispheres
140.0
2109
Female, age 72, unknown
139.7
1968
Male, age 76, left hemisphere
138.5
2454
Male, age 74, left hemisphere
88.9
2115
Male, age 80, left hemisphere
69.7
2319
Female, age 91, both hemispheres
64.7
Pontine raphe nucleus nTPM: 122.2
2122
Female, age 85, midline
134.8
2853
Male, age 76, midline
109.7
Posteroventral cochlear nucleus nTPM: 56.8
2752
Female, age 85, both hemispheres
84.1
2070
Male, age 76, both hemispheres
63.3
2371
Male, age 61, both hemispheres
61.9
2341
Male, age 80, both hemispheres
42.8
2135
Female, age 91, both hemispheres
31.9
Principal sensory trigeminal nucleus nTPM: 108.5
2158
Male, age 61, both hemispheres
149.5
2008
Male, age 80, left hemisphere
139.1
2324
Male, age 76, both hemispheres
82.0
2367
Female, age 91, left hemisphere
63.2
Reticular pontine nucleus, caudal nTPM: 91.8
2092
Male, age 76, both hemispheres
115.9
2332
Male, age 80, right hemisphere
106.7
2559
Male, age 74, both hemispheres
83.0
2457
Female, age 91, both hemispheres
61.5
Reticular pontine nucleus, oral nTPM: 89.5
2012
Female, age 85, both hemispheres
129.2
2167
Male, age 76, both hemispheres
94.1
1939
Male, age 80, both hemispheres
84.6
2361
Male, age 74, both hemispheres
74.6
2366
Female, age 91, both hemispheres
64.9
Reticulotegmental nucleus nTPM: 89.6
2325
Male, age 76, both hemispheres
118.2
2452
Male, age 74, both hemispheres
85.1
2322
Female, age 91, both hemispheres
80.6
2333
Male, age 80, both hemispheres
74.4
Spinal trigeminal nucleus, oral nTPM: 96.9
1978
Male, age 76, both hemispheres
128.9
2737
Female, age 85, both hemispheres
87.0
2164
Male, age 80, both hemispheres
74.9
Subcoeruleus area nTPM: 93.5
2089
Male, age 76, left hemisphere
112.3
1958
Male, age 80, both hemispheres
111.1
2323
Female, age 91, left hemisphere
88.9
2451
Male, age 74, both hemispheres
86.6
2369
Female, age 85, left hemisphere
68.8
Superior olive nTPM: 108.1
1875
Female, age 85, both hemispheres
147.2
2020
Male, age 76, both hemispheres
121.7
2364
Male, age 74, right hemisphere
113.6
2329
Male, age 80, right hemisphere
86.7
2561
Female, age 91, both hemispheres
71.4
Ventral periolivary nuclei nTPM: 114.7
2130
Female, age 85, both hemispheres
130.2
2023
Male, age 76, both hemispheres
115.8
2165
Male, age 80, both hemispheres
115.7
2794
Female, age 91, left hemisphere
97.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 88.3
2449
Male, age 74, both hemispheres
117.8
1959
Male, age 76, both hemispheres
117.7
2840
Female, age 85, both hemispheres
93.8
2161
Male, age 80, both hemispheres
82.4
2359
Male, age 61, both hemispheres
66.3
2456
Female, age 91, both hemispheres
52.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
227.4
Pig sample
Sample description
nTPM
Pons nTPM: 227.4
Samples: 4
Max nTPM: 340.1
Min nTPM: 130.4
Sample A
Female
340.1
Sample B
Female
130.4
Sample C
Male
173.5
Sample D
Male
265.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
