HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:33.8 nTPM
HPA Brain:52.1 nTPM
GTEx:33.8 nTPM
FANTOM5:22.1 Scaled Tags Per Million
Pig:45.6 nTPM
Mouse:63.8 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022997Antibody CAB011205
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.1
Sample id Sample description nTPM
Hippocampus
nTPM: 48.4
1898 Male, age 80, left hemisphere 56.4
2621 Female, age 67, right hemisphere 53.9
2529 Female, age 94, left hemisphere 48.9
1855 Male, age 76, left hemisphere 46.3
2148 Female, age 91, left hemisphere 43.2
1911 Female, age 85, right hemisphere 41.4
Dentate gyrus
nTPM: 47.8
2530 Female, age 94, left hemisphere 55.5
1927 Female, age 91, both hemispheres 49.1
2010 Male, age 76, both hemispheres 48.7
2531 Female, age 67, both hemispheres 47.5
2246 Female, age 85, both hemispheres 44.8
2528 Male, age 74, both hemispheres 41.3
Entorhinal gyrus
nTPM: 50.1
2764 Male, age 80, right hemisphere 56.1
2613 Female, age 94, left hemisphere 54.6
1938 Female, age 85, left hemisphere 48.4
1787 Male, age 76, left hemisphere 47.8
2117 Female, age 91, right hemisphere 47.3
2686 Male, age 75, right hemisphere 46.3
Hippocampus, CA1
nTPM: 49.7
2749 Male, age 80, left hemisphere 68.0
1873 Female, age 85, both hemispheres 51.3
2527 Male, age 74, both hemispheres 47.3
2045 Male, age 76, both hemispheres 43.4
2082 Female, age 91, right hemisphere 38.4
Hippocampus, CA2
nTPM: 48.8
1963 Male, age 80, left hemisphere 61.9
1892 Male, age 76, both hemispheres 54.1
2437 Female, age 94, left hemisphere 48.5
1940 Female, age 85, left hemisphere 46.6
2113 Female, age 91, right hemisphere 42.8
2249 Male, age 74, both hemispheres 38.7
Hippocampus, CA3
nTPM: 49.6
2620 Female, age 94, left hemisphere 57.3
2137 Male, age 80, left hemisphere 54.5
1867 Male, age 76, both hemispheres 50.0
2861 Female, age 67, both hemispheres 46.9
1891 Female, age 85, both hemispheres 46.4
2436 Male, age 74, both hemispheres 42.5
Parahippocampal cortex
nTPM: 45.6
1850 Male, age 80, both hemispheres 53.3
2245 Female, age 91, both hemispheres 50.7
1990 Female, age 91, right hemisphere 47.8
2693 Female, age 94, both hemispheres 46.4
1933 Female, age 85, both hemispheres 45.9
2532 Female, age 72, left hemisphere 44.3
2692 Male, age 74, both hemispheres 43.7
2250 Female, age 67, right hemisphere 42.7
2622 Female, age 67, right hemisphere 41.5
2018 Male, age 76, both hemispheres 39.6
Perirhinal gyrus
nTPM: 52.1
1794 Male, age 80, right hemisphere 58.8
1847 Female, age 91, left hemisphere 55.1
1841 Female, age 85, right hemisphere 51.3
2521 Female, age 94, right hemisphere 49.3
2848 Male, age 76, right hemisphere 46.0
Subiculum
nTPM: 45.5
1901 Male, age 80, both hemispheres 51.7
1977 Female, age 85, both hemispheres 47.5
2438 Female, age 94, left hemisphere 47.2
2042 Male, age 76, both hemispheres 46.0
2619 Male, age 74, both hemispheres 42.7
2729 Female, age 91, right hemisphere 38.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.8
Samples: 197

Max nTPM: 63.3
Min nTPM: 19.4
Std nTPM: 6.6
Median nTPM: 33.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 63.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 48.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 47.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 46.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 45.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 45.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 45.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 45.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 45.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.1
FF:10153-102I9 76 years, female 29.7
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.6
Pig sample Sample description nTPM
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 49.4
Min nTPM: 34.1
Sample A Female 49.4
Sample B Female 36.3
Sample C Male 42.0
Sample D Male 34.1
Dorsal hippocampus
nTPM: 45.6
Samples: 4

Max nTPM: 54.2
Min nTPM: 36.1
Sample A Female 54.2
Sample B Female 48.0
Sample C Male 44.2
Sample D Male 36.1
Entorhinal cortex
nTPM: 40.6
Samples: 4

Max nTPM: 44.2
Min nTPM: 36.5
Sample A Female 44.2
Sample B Female 40.5
Sample C Male 41.0
Sample D Male 36.5
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 54.0
Min nTPM: 30.2
Sample A Female 43.3
Sample B Female 30.2
Sample C Male 54.0
Sample D Male 50.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 59.8
Min nTPM: 55.9
Sample A Male 57.3
Sample B Male 55.9
Sample C Female 57.5
Sample D Female 59.8
Hippocampal formation
nTPM: 63.9
Samples: 4

Max nTPM: 68.3
Min nTPM: 58.2
Sample A Male 58.2
Sample B Male 66.6
Sample C Female 68.3
Sample D Female 62.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
68862108 Antisense, RP_050301_01_E09, Mouse strain C57BL/6J (56 days, male) 14.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org