HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:172.7 nTPM
HPA Brain:223.3 nTPM
GTEx:172.7 nTPM
FANTOM5:199.0 Scaled Tags Per Million
Pig:72.3 nTPM
Mouse:184.5 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 223.3
Sample id Sample description nTPM
Hippocampus
nTPM: 167.6
1898 Male, age 80, left hemisphere 221.5
2621 Female, age 67, right hemisphere 171.2
2529 Female, age 94, left hemisphere 164.4
1855 Male, age 76, left hemisphere 160.7
2148 Female, age 91, left hemisphere 145.1
1911 Female, age 85, right hemisphere 143.0
Dentate gyrus
nTPM: 177.6
2010 Male, age 76, both hemispheres 218.3
1927 Female, age 91, both hemispheres 204.2
2528 Male, age 74, both hemispheres 187.8
2530 Female, age 94, left hemisphere 162.2
2246 Female, age 85, both hemispheres 158.2
2531 Female, age 67, both hemispheres 135.0
Entorhinal gyrus
nTPM: 155.8
2764 Male, age 80, right hemisphere 202.1
1938 Female, age 85, left hemisphere 184.1
1787 Male, age 76, left hemisphere 166.8
2117 Female, age 91, right hemisphere 150.2
2613 Female, age 94, left hemisphere 117.8
2686 Male, age 75, right hemisphere 113.8
Hippocampus, CA1
nTPM: 203.7
2749 Male, age 80, left hemisphere 281.7
1873 Female, age 85, both hemispheres 208.2
2045 Male, age 76, both hemispheres 184.4
2527 Male, age 74, both hemispheres 181.8
2082 Female, age 91, right hemisphere 162.3
Hippocampus, CA2
nTPM: 196.4
1963 Male, age 80, left hemisphere 236.5
2249 Male, age 74, both hemispheres 219.5
1892 Male, age 76, both hemispheres 211.7
2437 Female, age 94, left hemisphere 174.2
1940 Female, age 85, left hemisphere 173.3
2113 Female, age 91, right hemisphere 163.0
Hippocampus, CA3
nTPM: 171.3
2436 Male, age 74, both hemispheres 225.9
1867 Male, age 76, both hemispheres 206.3
2137 Male, age 80, left hemisphere 203.7
1891 Female, age 85, both hemispheres 154.9
2620 Female, age 94, left hemisphere 131.8
2861 Female, age 67, both hemispheres 105.0
Parahippocampal cortex
nTPM: 170.4
1850 Male, age 80, both hemispheres 229.6
2250 Female, age 67, right hemisphere 207.1
1933 Female, age 85, both hemispheres 206.6
2018 Male, age 76, both hemispheres 197.5
1990 Female, age 91, right hemisphere 182.6
2245 Female, age 91, both hemispheres 167.9
2532 Female, age 72, left hemisphere 167.6
2693 Female, age 94, both hemispheres 131.9
2622 Female, age 67, right hemisphere 118.2
2692 Male, age 74, both hemispheres 95.2
Perirhinal gyrus
nTPM: 223.3
1847 Female, age 91, left hemisphere 289.5
1841 Female, age 85, right hemisphere 242.5
1794 Male, age 80, right hemisphere 237.6
2848 Male, age 76, right hemisphere 174.1
2521 Female, age 94, right hemisphere 173.0
Subiculum
nTPM: 165.7
1977 Female, age 85, both hemispheres 203.2
2438 Female, age 94, left hemisphere 172.5
1901 Male, age 80, both hemispheres 160.1
2042 Male, age 76, both hemispheres 154.5
2619 Male, age 74, both hemispheres 152.3
2729 Female, age 91, right hemisphere 151.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 172.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 172.7
Samples: 197

Max nTPM: 334.2
Min nTPM: 95.4
Std nTPM: 43.4
Median nTPM: 163.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 334.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 305.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 277.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 276.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 276.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 274.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 273.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 271.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 265.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 260.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 259.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.0
FF:10169-103B7 60 years, female 265.8
FF:10153-102I9 76 years, female 132.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.3
Pig sample Sample description nTPM
Subiculum
nTPM: 72.0
Samples: 4

Max nTPM: 88.4
Min nTPM: 65.5
Sample A Female 88.4
Sample B Female 67.6
Sample C Male 65.5
Sample D Male 66.6
Dorsal hippocampus
nTPM: 72.3
Samples: 4

Max nTPM: 82.6
Min nTPM: 59.9
Sample A Female 82.6
Sample B Female 76.5
Sample C Male 70.2
Sample D Male 59.9
Entorhinal cortex
nTPM: 69.3
Samples: 4

Max nTPM: 82.5
Min nTPM: 56.0
Sample A Female 69.6
Sample B Female 82.5
Sample C Male 69.1
Sample D Male 56.0
Ventral hippocampus
nTPM: 68.4
Samples: 4

Max nTPM: 79.4
Min nTPM: 59.8
Sample A Female 79.4
Sample B Female 59.8
Sample C Male 70.1
Sample D Male 64.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 184.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 172.3
Samples: 4

Max nTPM: 180.2
Min nTPM: 159.0
Sample A Male 159.0
Sample B Male 171.8
Sample C Female 178.0
Sample D Female 180.2
Hippocampal formation
nTPM: 184.5
Samples: 4

Max nTPM: 207.8
Min nTPM: 173.4
Sample A Male 207.8
Sample B Male 179.9
Sample C Female 176.9
Sample D Female 173.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
2518 Antisense, RP_040420_01_F04, Mouse strain C57BL/6J (56 days, male) 17.4
2517 Antisense, RP_040420_01_F04, Mouse strain C57BL/6J (56 days, male) 11.1

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