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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
253.4
nTPM
FANTOM5:
175.6
Scaled Tags Per Million
Pig:
102.7
nTPM
Allen mouse:
11.7
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
253.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 143.7
2090
Male, age 80, both hemispheres
166.4
2188
Female, age 91, both hemispheres
148.9
1984
Male, age 76, both hemispheres
135.6
2301
Female, age 85, both hemispheres
123.8
Dorsal cochlear nucleus nTPM: 170.6
2187
Female, age 91, both hemispheres
182.5
2370
Male, age 61, both hemispheres
175.7
2058
Male, age 76, both hemispheres
173.8
2378
Male, age 80, both hemispheres
162.2
2802
Male, age 74, right hemisphere
158.7
Dorsal tegmental nucleus nTPM: 185.0
2083
Male, age 80, both hemispheres
217.3
2326
Male, age 74, both hemispheres
185.5
2358
Male, age 61, both hemispheres
178.1
1936
Male, age 76, left hemisphere
159.1
Dorsolateral tegmental area nTPM: 202.9
2360
Male, age 74, both hemispheres
235.6
2654
Male, age 80, both hemispheres
222.4
2751
Female, age 85, both hemispheres
199.0
2141
Male, age 76, both hemispheres
188.2
2337
Male, age 61, both hemispheres
169.3
Kolliker-Fuse nucleus nTPM: 182.3
2315
Male, age 76, right hemisphere
208.1
2163
Male, age 80, both hemispheres
202.6
2793
Female, age 91, left hemisphere
136.3
Lateral lemniscal nuclei nTPM: 152.3
2036
Male, age 80, both hemispheres
178.5
2169
Male, age 76, both hemispheres
178.2
2746
Female, age 85, left hemisphere
152.2
2453
Male, age 74, right hemisphere
127.2
2320
Female, age 91, left hemisphere
125.1
Lateral parabrachial nucleus nTPM: 169.4
2139
Female, age 85, right hemisphere
193.5
2013
Male, age 80, both hemispheres
175.8
2792
Male, age 76, both hemispheres
164.0
2790
Male, age 61, both hemispheres
144.0
Lateral vestibular nucleus nTPM: 163.3
2184
Male, age 76, both hemispheres
170.2
2311
Male, age 80, both hemispheres
156.4
Locus coeruleus nTPM: 253.4
2123
Female, age 91, both hemispheres
343.6
2014
Male, age 55, unknown
310.8
2317
Female, age 72, unknown
241.2
2720
Male, age 74, both hemispheres
233.7
1980
Male, age 76, both hemispheres
226.7
2788
Male, age 74, unknown
212.3
2162
Male, age 80, both hemispheres
205.7
Medial parabrachial nucleus nTPM: 178.7
2170
Female, age 91, both hemispheres
216.9
2463
Female, age 85, right hemisphere
180.3
2854
Male, age 80, both hemispheres
173.0
2786
Male, age 76, both hemispheres
162.9
2156
Male, age 61, both hemispheres
160.4
Medial periolivary nuclei nTPM: 158.5
2791
Male, age 74, right hemisphere
190.1
2063
Male, age 76, both hemispheres
184.3
2171
Female, age 85, both hemispheres
176.0
2081
Male, age 80, both hemispheres
127.8
2458
Female, age 91, both hemispheres
114.5
Motor facial nucleus nTPM: 153.2
2062
Male, age 76, both hemispheres
197.9
2365
Male, age 74, right hemisphere
192.3
2126
Male, age 61, both hemispheres
159.3
2697
Female, age 85, both hemispheres
131.1
2795
Female, age 91, both hemispheres
128.8
2327
Male, age 80, both hemispheres
109.7
Motor trigeminal nucleus nTPM: 150.0
2560
Male, age 74, both hemispheres
168.7
2309
Male, age 76, both hemispheres
161.7
2335
Male, age 61, both hemispheres
157.4
2079
Male, age 80, both hemispheres
142.1
2321
Female, age 91, both hemispheres
120.0
Nuclei of the trapezoid body nTPM: 166.0
1983
Male, age 76, both hemispheres
199.9
2159
Male, age 61, both hemispheres
189.1
2735
Female, age 85, both hemispheres
179.5
2166
Male, age 80, both hemispheres
136.7
2368
Female, age 91, both hemispheres
124.9
Nucleus raphe magnus nTPM: 164.0
2160
Male, age 61, both hemispheres
215.6
2455
Male, age 74, both hemispheres
191.5
2172
Female, age 85, both hemispheres
170.6
2051
Male, age 76, both hemispheres
157.3
2328
Male, age 80, both hemispheres
126.2
2459
Female, age 91, both hemispheres
122.5
Paramedian reticular nucleus nTPM: 201.0
2050
Female, age 85, both hemispheres
227.4
2057
Male, age 80, both hemispheres
213.7
2313
Male, age 61, both hemispheres
195.6
2052
Male, age 76, both hemispheres
167.4
Pedunculopontine tegmental nucleus nTPM: 196.1
2334
Male, age 80, both hemispheres
211.9
1921
Female, age 85, both hemispheres
202.3
2338
Male, age 61, both hemispheres
174.0
Pontine nuclei nTPM: 180.5
2727
Male, age 61, right hemisphere
225.0
1863
Male, age 55, unknown
217.4
2787
Female, age 85, both hemispheres
212.3
2109
Female, age 72, unknown
183.6
2454
Male, age 74, left hemisphere
173.1
1968
Male, age 76, left hemisphere
153.3
2115
Male, age 80, left hemisphere
145.9
2319
Female, age 91, both hemispheres
133.6
Pontine raphe nucleus nTPM: 198.7
2122
Female, age 85, midline
199.9
2853
Male, age 76, midline
197.6
Posteroventral cochlear nucleus nTPM: 164.3
2752
Female, age 85, both hemispheres
210.2
2371
Male, age 61, both hemispheres
172.3
2070
Male, age 76, both hemispheres
168.8
2135
Female, age 91, both hemispheres
139.9
2341
Male, age 80, both hemispheres
130.3
Principal sensory trigeminal nucleus nTPM: 161.8
2158
Male, age 61, both hemispheres
202.3
2324
Male, age 76, both hemispheres
160.1
2008
Male, age 80, left hemisphere
152.1
2367
Female, age 91, left hemisphere
132.8
Reticular pontine nucleus, caudal nTPM: 145.6
2092
Male, age 76, both hemispheres
183.2
2559
Male, age 74, both hemispheres
171.2
2332
Male, age 80, right hemisphere
126.3
2457
Female, age 91, both hemispheres
101.6
Reticular pontine nucleus, oral nTPM: 177.9
2012
Female, age 85, both hemispheres
200.2
1939
Male, age 80, both hemispheres
198.7
2167
Male, age 76, both hemispheres
184.9
2361
Male, age 74, both hemispheres
184.2
2366
Female, age 91, both hemispheres
121.6
Reticulotegmental nucleus nTPM: 159.0
2325
Male, age 76, both hemispheres
181.8
2452
Male, age 74, both hemispheres
159.1
2333
Male, age 80, both hemispheres
147.7
2322
Female, age 91, both hemispheres
147.2
Spinal trigeminal nucleus, oral nTPM: 158.8
2737
Female, age 85, both hemispheres
176.2
1978
Male, age 76, both hemispheres
152.1
2164
Male, age 80, both hemispheres
148.0
Subcoeruleus area nTPM: 169.3
2323
Female, age 91, left hemisphere
197.3
2451
Male, age 74, both hemispheres
183.2
1958
Male, age 80, both hemispheres
180.5
2369
Female, age 85, left hemisphere
162.4
2089
Male, age 76, left hemisphere
123.1
Superior olive nTPM: 163.6
2364
Male, age 74, right hemisphere
241.1
1875
Female, age 85, both hemispheres
178.6
2020
Male, age 76, both hemispheres
170.7
2329
Male, age 80, right hemisphere
121.2
2561
Female, age 91, both hemispheres
106.3
Ventral periolivary nuclei nTPM: 151.6
2130
Female, age 85, both hemispheres
169.0
2023
Male, age 76, both hemispheres
165.6
2165
Male, age 80, both hemispheres
154.5
2794
Female, age 91, left hemisphere
117.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 156.0
2449
Male, age 74, both hemispheres
178.6
2359
Male, age 61, both hemispheres
170.9
2840
Female, age 85, both hemispheres
169.0
1959
Male, age 76, both hemispheres
149.8
2161
Male, age 80, both hemispheres
140.3
2456
Female, age 91, both hemispheres
127.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
102.7
Pig sample
Sample description
nTPM
Pons nTPM: 102.7
Samples: 4
Max nTPM: 120.4
Min nTPM: 95.7
Sample A
Female
97.5
Sample B
Female
95.7
Sample C
Male
120.4
Sample D
Male
97.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
