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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
206.6
nTPM
GTEx:
206.6
nTPM
FANTOM5:
97.6
Scaled Tags Per Million
Pig:
39.3
nTPM
Mouse:
234.6
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
206.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 206.6
Samples: 105
Max nTPM: 275.0
Min nTPM: 144.1
Std nTPM: 25.9
Median nTPM: 0.0
308_1
70 years, female
275.0
414_1
84 years, female
262.1
162_1
79 years, female
260.0
379_1
60 years, male
248.6
404_1
82 years, female
245.0
99_1
64 years, male
244.8
415_1
77 years, female
244.0
347_1
72 years, male
239.8
145_1
84 years, male
238.9
177_1
74 years, male
237.5
189_1
76 years, male
237.1
117_1
61 years, male
236.3
120_1
70 years, female
235.2
243_1
75 years, male
234.5
115_1
83 years, male
233.6
317_1
60 years, male
231.1
246_1
77 years, male
231.0
491_1
89 years, female
231.0
119_1
70 years, female
230.8
81_1
67 years, male
230.7
413_1
59 years, female
230.6
324_1
76 years, male
229.2
490_1
67 years, female
228.7
173_1
67 years, male
228.3
499_1
55 years, female
227.3
425_1
59 years, female
226.9
447_1
81 years, male
225.9
229_1
69 years, female
224.7
313_1
79 years, female
224.2
126_1
63 years, male
224.1
526_1
61 years, male
223.8
386_1
76 years, male
223.0
142_1
61 years, female
222.0
468_1
89 years, male
221.6
376_1
75 years, female
220.4
307_1
66 years, female
220.2
315_1
62 years, female
220.1
42_1
85 years, male
219.4
452_1
88 years, female
216.4
377_1
82 years, female
216.2
266_1
85 years, male
215.5
495_1
57 years, female
215.1
254_1
77 years, female
215.0
389_1
86 years, female
214.0
321_1
62 years, female
213.5
466_1
57 years, female
213.4
265_1
87 years, male
212.2
41_1
94 years, female
211.8
394_1
75 years, female
211.7
349_1
83 years, male
211.4
18_1
88 years, male
210.7
319_1
81 years, male
210.1
480_1
63 years, male
209.4
375_1
74 years, female
208.5
35_1
74 years, female
207.1
109_1
81 years, female
207.1
89_1
63 years, male
206.3
6_1
73 years, female
204.7
17_1
71 years, male
204.0
9_1
66 years, female
203.2
396_1
62 years, male
202.6
501_1
88 years, male
202.4
384_1
83 years, male
202.1
137_1
83 years, male
201.2
311_1
78 years, male
200.5
405_1
91 years, male
200.3
172_1
72 years, female
199.3
335_1
73 years, female
197.6
153_1
70 years, female
196.6
406_1
79 years, male
196.3
218_1
71 years, female
196.0
286_1
68 years, female
195.5
2_1
77 years, female
194.8
4_1
88 years, female
193.1
32_1
67 years, male
190.6
355_1
70 years, female
190.4
351_1
91 years, male
189.3
350_1
84 years, female
188.0
149_1
88 years, male
186.3
322_1
76 years, male
186.1
352_1
62 years, male
185.4
163_1
78 years, male
185.2
316_1
62 years, male
183.7
518_1
75 years, female
181.7
237_1
82 years, male
181.2
139_1
64 years, female
180.1
217_1
76 years, male
178.7
506_1
65 years, male
176.3
288_1
66 years, female
175.9
503_1
68 years, male
175.9
356_1
87 years, female
175.2
43_1
64 years, female
174.4
292_1
71 years, male
173.3
354_1
81 years, female
172.8
264_1
73 years, female
172.5
517_1
88 years, male
170.0
353_1
82 years, female
167.1
348_1
84 years, male
166.8
293_1
68 years, female
164.6
291_1
76 years, male
161.1
318_1
68 years, male
160.7
314_1
67 years, male
160.1
295_1
61 years, female
157.4
251_1
78 years, male
156.8
320_1
89 years, female
144.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.