HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:1213.4 nTPM
HPA Brain:435.1 nTPM
GTEx:1213.4 nTPM
FANTOM5:322.5 Scaled Tags Per Million
Pig:337.6 nTPM
Mouse:212.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006047
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 435.1
Sample id Sample description nTPM
Hippocampus
nTPM: 435.1
2529 Female, age 94, left hemisphere 515.5
1898 Male, age 80, left hemisphere 486.8
2621 Female, age 67, right hemisphere 468.3
1911 Female, age 85, right hemisphere 389.4
1855 Male, age 76, left hemisphere 387.8
2148 Female, age 91, left hemisphere 363.0
Dentate gyrus
nTPM: 402.9
2530 Female, age 94, left hemisphere 531.1
2010 Male, age 76, both hemispheres 415.9
2531 Female, age 67, both hemispheres 415.5
2246 Female, age 85, both hemispheres 410.9
1927 Female, age 91, both hemispheres 343.0
2528 Male, age 74, both hemispheres 300.9
Entorhinal gyrus
nTPM: 397.3
2686 Male, age 75, right hemisphere 488.2
1787 Male, age 76, left hemisphere 431.8
2117 Female, age 91, right hemisphere 399.5
1938 Female, age 85, left hemisphere 381.1
2764 Male, age 80, right hemisphere 355.7
2613 Female, age 94, left hemisphere 327.4
Hippocampus, CA1
nTPM: 372.2
2527 Male, age 74, both hemispheres 407.6
2045 Male, age 76, both hemispheres 388.5
2749 Male, age 80, left hemisphere 369.7
2082 Female, age 91, right hemisphere 361.4
1873 Female, age 85, both hemispheres 333.6
Hippocampus, CA2
nTPM: 375.0
2437 Female, age 94, left hemisphere 430.5
1963 Male, age 80, left hemisphere 411.7
2113 Female, age 91, right hemisphere 372.8
1892 Male, age 76, both hemispheres 350.5
2249 Male, age 74, both hemispheres 342.3
1940 Female, age 85, left hemisphere 342.0
Hippocampus, CA3
nTPM: 353.0
2861 Female, age 67, both hemispheres 417.3
1867 Male, age 76, both hemispheres 382.2
1891 Female, age 85, both hemispheres 375.6
2137 Male, age 80, left hemisphere 327.8
2436 Male, age 74, both hemispheres 327.2
2620 Female, age 94, left hemisphere 287.8
Parahippocampal cortex
nTPM: 389.4
2018 Male, age 76, both hemispheres 522.0
2245 Female, age 91, both hemispheres 445.0
2532 Female, age 72, left hemisphere 426.8
2250 Female, age 67, right hemisphere 424.5
1933 Female, age 85, both hemispheres 390.9
1850 Male, age 80, both hemispheres 376.1
2692 Male, age 74, both hemispheres 357.3
1990 Female, age 91, right hemisphere 335.2
2622 Female, age 67, right hemisphere 330.9
2693 Female, age 94, both hemispheres 284.9
Perirhinal gyrus
nTPM: 388.7
1847 Female, age 91, left hemisphere 417.5
1794 Male, age 80, right hemisphere 413.6
1841 Female, age 85, right hemisphere 394.0
2848 Male, age 76, right hemisphere 373.5
2521 Female, age 94, right hemisphere 344.8
Subiculum
nTPM: 405.5
2042 Male, age 76, both hemispheres 490.1
2438 Female, age 94, left hemisphere 473.0
1977 Female, age 85, both hemispheres 412.6
1901 Male, age 80, both hemispheres 400.0
2619 Male, age 74, both hemispheres 357.3
2729 Female, age 91, right hemisphere 299.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1213.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1213.4
Samples: 197

Max nTPM: 3868.8
Min nTPM: 458.8
Std nTPM: 510.7
Median nTPM: 1100.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3868.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3124.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3002.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2711.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2699.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2547.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2510.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2389.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2294.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2268.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 2215.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 322.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 322.5
FF:10169-103B7 60 years, female 353.1
FF:10153-102I9 76 years, female 292.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 337.6
Pig sample Sample description nTPM
Subiculum
nTPM: 283.0
Samples: 4

Max nTPM: 432.7
Min nTPM: 203.3
Sample A Female 432.7
Sample B Female 271.7
Sample C Male 203.3
Sample D Male 224.1
Dorsal hippocampus
nTPM: 337.6
Samples: 4

Max nTPM: 462.1
Min nTPM: 225.1
Sample A Female 462.1
Sample B Female 279.8
Sample C Male 383.3
Sample D Male 225.1
Entorhinal cortex
nTPM: 296.2
Samples: 4

Max nTPM: 342.6
Min nTPM: 233.6
Sample A Female 290.4
Sample B Female 342.6
Sample C Male 318.0
Sample D Male 233.6
Ventral hippocampus
nTPM: 292.1
Samples: 4

Max nTPM: 314.0
Min nTPM: 246.0
Sample A Female 309.2
Sample B Female 246.0
Sample C Male 314.0
Sample D Male 299.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 212.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 208.6
Samples: 4

Max nTPM: 228.6
Min nTPM: 191.6
Sample A Male 205.1
Sample B Male 208.9
Sample C Female 228.6
Sample D Female 191.6
Hippocampal formation
nTPM: 212.2
Samples: 4

Max nTPM: 255.7
Min nTPM: 187.8
Sample A Male 255.7
Sample B Male 198.9
Sample C Female 187.8
Sample D Female 206.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68441496 Antisense, RP_041214_02_E01, Mouse strain C57BL/6J (56 days, male) 2.6

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