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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
561.3
nTPM
FANTOM5:
374.7
Scaled Tags Per Million
Pig:
377.9
nTPM
Allen mouse:
0.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
561.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 496.0
2090
Male, age 80, both hemispheres
566.4
2188
Female, age 91, both hemispheres
547.9
2301
Female, age 85, both hemispheres
498.7
1984
Male, age 76, both hemispheres
370.9
Dorsal cochlear nucleus nTPM: 474.8
2187
Female, age 91, both hemispheres
545.9
2802
Male, age 74, right hemisphere
531.6
2370
Male, age 61, both hemispheres
451.1
2378
Male, age 80, both hemispheres
435.6
2058
Male, age 76, both hemispheres
409.7
Dorsal tegmental nucleus nTPM: 561.3
2358
Male, age 61, both hemispheres
687.7
2083
Male, age 80, both hemispheres
567.0
2326
Male, age 74, both hemispheres
533.0
1936
Male, age 76, left hemisphere
457.4
Dorsolateral tegmental area nTPM: 510.6
2337
Male, age 61, both hemispheres
686.3
2654
Male, age 80, both hemispheres
562.3
2141
Male, age 76, both hemispheres
461.3
2751
Female, age 85, both hemispheres
443.3
2360
Male, age 74, both hemispheres
399.8
Kolliker-Fuse nucleus nTPM: 490.1
2793
Female, age 91, left hemisphere
501.4
2163
Male, age 80, both hemispheres
491.0
2315
Male, age 76, right hemisphere
478.0
Lateral lemniscal nuclei nTPM: 370.5
2169
Male, age 76, both hemispheres
429.1
2320
Female, age 91, left hemisphere
389.9
2453
Male, age 74, right hemisphere
381.1
2746
Female, age 85, left hemisphere
370.0
2036
Male, age 80, both hemispheres
282.6
Lateral parabrachial nucleus nTPM: 494.5
2792
Male, age 76, both hemispheres
578.2
2013
Male, age 80, both hemispheres
523.6
2790
Male, age 61, both hemispheres
443.0
2139
Female, age 85, right hemisphere
433.2
Lateral vestibular nucleus nTPM: 497.1
2311
Male, age 80, both hemispheres
600.4
2184
Male, age 76, both hemispheres
393.8
Locus coeruleus nTPM: 472.9
2720
Male, age 74, both hemispheres
564.5
2162
Male, age 80, both hemispheres
513.8
2123
Female, age 91, both hemispheres
503.0
2014
Male, age 55, unknown
479.0
2317
Female, age 72, unknown
428.3
1980
Male, age 76, both hemispheres
426.0
2788
Male, age 74, unknown
395.7
Medial parabrachial nucleus nTPM: 498.7
2170
Female, age 91, both hemispheres
601.1
2854
Male, age 80, both hemispheres
526.2
2156
Male, age 61, both hemispheres
500.0
2786
Male, age 76, both hemispheres
454.1
2463
Female, age 85, right hemisphere
411.7
Medial periolivary nuclei nTPM: 387.6
2081
Male, age 80, both hemispheres
443.3
2063
Male, age 76, both hemispheres
412.9
2458
Female, age 91, both hemispheres
401.7
2171
Female, age 85, both hemispheres
348.9
2791
Male, age 74, right hemisphere
331.2
Motor facial nucleus nTPM: 400.3
2697
Female, age 85, both hemispheres
459.2
2126
Male, age 61, both hemispheres
428.1
2365
Male, age 74, right hemisphere
402.6
2795
Female, age 91, both hemispheres
391.5
2062
Male, age 76, both hemispheres
387.1
2327
Male, age 80, both hemispheres
333.4
Motor trigeminal nucleus nTPM: 439.3
2335
Male, age 61, both hemispheres
531.8
2321
Female, age 91, both hemispheres
440.4
2309
Male, age 76, both hemispheres
439.1
2560
Male, age 74, both hemispheres
398.1
2079
Male, age 80, both hemispheres
386.9
Nuclei of the trapezoid body nTPM: 380.8
1983
Male, age 76, both hemispheres
517.6
2166
Male, age 80, both hemispheres
411.5
2159
Male, age 61, both hemispheres
342.9
2368
Female, age 91, both hemispheres
328.1
2735
Female, age 85, both hemispheres
304.0
Nucleus raphe magnus nTPM: 384.4
2051
Male, age 76, both hemispheres
438.1
2455
Male, age 74, both hemispheres
395.1
2328
Male, age 80, both hemispheres
392.4
2459
Female, age 91, both hemispheres
376.2
2172
Female, age 85, both hemispheres
359.3
2160
Male, age 61, both hemispheres
345.1
Paramedian reticular nucleus nTPM: 451.8
2052
Male, age 76, both hemispheres
521.5
2050
Female, age 85, both hemispheres
444.0
2313
Male, age 61, both hemispheres
432.2
2057
Male, age 80, both hemispheres
409.4
Pedunculopontine tegmental nucleus nTPM: 514.8
2338
Male, age 61, both hemispheres
580.2
2334
Male, age 80, both hemispheres
540.1
1921
Female, age 85, both hemispheres
424.1
Pontine nuclei nTPM: 412.8
2319
Female, age 91, both hemispheres
493.3
1863
Male, age 55, unknown
457.1
1968
Male, age 76, left hemisphere
434.1
2115
Male, age 80, left hemisphere
428.6
2454
Male, age 74, left hemisphere
426.6
2787
Female, age 85, both hemispheres
391.2
2109
Female, age 72, unknown
369.8
2727
Male, age 61, right hemisphere
301.5
Pontine raphe nucleus nTPM: 424.4
2853
Male, age 76, midline
434.5
2122
Female, age 85, midline
414.3
Posteroventral cochlear nucleus nTPM: 492.5
2341
Male, age 80, both hemispheres
557.9
2135
Female, age 91, both hemispheres
536.4
2371
Male, age 61, both hemispheres
488.9
2070
Male, age 76, both hemispheres
450.9
2752
Female, age 85, both hemispheres
428.5
Principal sensory trigeminal nucleus nTPM: 389.7
2367
Female, age 91, left hemisphere
427.9
2324
Male, age 76, both hemispheres
424.1
2158
Male, age 61, both hemispheres
378.1
2008
Male, age 80, left hemisphere
328.8
Reticular pontine nucleus, caudal nTPM: 434.4
2457
Female, age 91, both hemispheres
486.8
2559
Male, age 74, both hemispheres
480.8
2092
Male, age 76, both hemispheres
465.7
2332
Male, age 80, right hemisphere
304.4
Reticular pontine nucleus, oral nTPM: 463.5
2366
Female, age 91, both hemispheres
526.2
2167
Male, age 76, both hemispheres
520.9
1939
Male, age 80, both hemispheres
499.2
2012
Female, age 85, both hemispheres
403.5
2361
Male, age 74, both hemispheres
367.8
Reticulotegmental nucleus nTPM: 450.9
2452
Male, age 74, both hemispheres
514.0
2322
Female, age 91, both hemispheres
452.9
2333
Male, age 80, both hemispheres
429.6
2325
Male, age 76, both hemispheres
407.1
Spinal trigeminal nucleus, oral nTPM: 432.0
2164
Male, age 80, both hemispheres
464.2
1978
Male, age 76, both hemispheres
436.8
2737
Female, age 85, both hemispheres
395.1
Subcoeruleus area nTPM: 467.2
2451
Male, age 74, both hemispheres
545.6
2369
Female, age 85, left hemisphere
473.2
2323
Female, age 91, left hemisphere
471.7
1958
Male, age 80, both hemispheres
470.5
2089
Male, age 76, left hemisphere
374.7
Superior olive nTPM: 386.3
2020
Male, age 76, both hemispheres
488.7
2561
Female, age 91, both hemispheres
405.8
2364
Male, age 74, right hemisphere
368.2
2329
Male, age 80, right hemisphere
347.1
1875
Female, age 85, both hemispheres
321.5
Ventral periolivary nuclei nTPM: 413.0
2023
Male, age 76, both hemispheres
439.9
2165
Male, age 80, both hemispheres
435.7
2794
Female, age 91, left hemisphere
394.4
2130
Female, age 85, both hemispheres
381.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 420.3
2840
Female, age 85, both hemispheres
465.3
2359
Male, age 61, both hemispheres
463.2
1959
Male, age 76, both hemispheres
427.6
2161
Male, age 80, both hemispheres
424.2
2449
Male, age 74, both hemispheres
381.2
2456
Female, age 91, both hemispheres
360.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
377.9
Pig sample
Sample description
nTPM
Pons nTPM: 377.9
Samples: 4
Max nTPM: 441.8
Min nTPM: 278.1
Sample A
Female
385.1
Sample B
Female
278.1
Sample C
Male
441.8
Sample D
Male
406.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
