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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
676.6
nTPM
FANTOM5:
232.1
Scaled Tags Per Million
Pig:
74.8
nTPM
Allen mouse:
10.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
676.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 654.2
2301
Female, age 85, both hemispheres
722.7
2188
Female, age 91, both hemispheres
722.0
2090
Male, age 80, both hemispheres
699.6
1984
Male, age 76, both hemispheres
472.5
Dorsal cochlear nucleus nTPM: 647.4
2378
Male, age 80, both hemispheres
701.7
2187
Female, age 91, both hemispheres
700.3
2802
Male, age 74, right hemisphere
700.2
2370
Male, age 61, both hemispheres
600.2
2058
Male, age 76, both hemispheres
534.9
Dorsal tegmental nucleus nTPM: 620.2
2358
Male, age 61, both hemispheres
662.0
2326
Male, age 74, both hemispheres
651.6
2083
Male, age 80, both hemispheres
613.1
1936
Male, age 76, left hemisphere
554.1
Dorsolateral tegmental area nTPM: 594.0
2337
Male, age 61, both hemispheres
717.7
2654
Male, age 80, both hemispheres
709.7
2751
Female, age 85, both hemispheres
553.5
2360
Male, age 74, both hemispheres
524.5
2141
Male, age 76, both hemispheres
464.5
Kolliker-Fuse nucleus nTPM: 638.2
2793
Female, age 91, left hemisphere
726.2
2315
Male, age 76, right hemisphere
640.1
2163
Male, age 80, both hemispheres
548.5
Lateral lemniscal nuclei nTPM: 505.2
2320
Female, age 91, left hemisphere
547.9
2169
Male, age 76, both hemispheres
547.5
2746
Female, age 85, left hemisphere
529.0
2453
Male, age 74, right hemisphere
460.1
2036
Male, age 80, both hemispheres
441.3
Lateral parabrachial nucleus nTPM: 669.0
2792
Male, age 76, both hemispheres
898.0
2013
Male, age 80, both hemispheres
707.4
2139
Female, age 85, right hemisphere
538.2
2790
Male, age 61, both hemispheres
532.3
Lateral vestibular nucleus nTPM: 585.4
2311
Male, age 80, both hemispheres
701.3
2184
Male, age 76, both hemispheres
469.6
Locus coeruleus nTPM: 468.2
2720
Male, age 74, both hemispheres
621.3
2162
Male, age 80, both hemispheres
516.0
2123
Female, age 91, both hemispheres
483.7
2317
Female, age 72, unknown
428.2
2788
Male, age 74, unknown
423.6
2014
Male, age 55, unknown
423.3
1980
Male, age 76, both hemispheres
381.3
Medial parabrachial nucleus nTPM: 604.0
2170
Female, age 91, both hemispheres
750.2
2854
Male, age 80, both hemispheres
670.2
2463
Female, age 85, right hemisphere
540.5
2156
Male, age 61, both hemispheres
530.4
2786
Male, age 76, both hemispheres
528.4
Medial periolivary nuclei nTPM: 541.8
2081
Male, age 80, both hemispheres
613.9
2458
Female, age 91, both hemispheres
594.5
2063
Male, age 76, both hemispheres
576.9
2791
Male, age 74, right hemisphere
466.1
2171
Female, age 85, both hemispheres
457.3
Motor facial nucleus nTPM: 558.9
2697
Female, age 85, both hemispheres
642.4
2795
Female, age 91, both hemispheres
610.7
2126
Male, age 61, both hemispheres
575.0
2062
Male, age 76, both hemispheres
543.4
2365
Male, age 74, right hemisphere
514.2
2327
Male, age 80, both hemispheres
467.5
Motor trigeminal nucleus nTPM: 550.4
2321
Female, age 91, both hemispheres
629.3
2335
Male, age 61, both hemispheres
554.9
2560
Male, age 74, both hemispheres
546.5
2309
Male, age 76, both hemispheres
527.6
2079
Male, age 80, both hemispheres
493.7
Nuclei of the trapezoid body nTPM: 539.7
1983
Male, age 76, both hemispheres
650.1
2166
Male, age 80, both hemispheres
577.6
2159
Male, age 61, both hemispheres
517.8
2368
Female, age 91, both hemispheres
508.1
2735
Female, age 85, both hemispheres
444.8
Nucleus raphe magnus nTPM: 511.2
2051
Male, age 76, both hemispheres
620.6
2459
Female, age 91, both hemispheres
586.3
2328
Male, age 80, both hemispheres
508.8
2172
Female, age 85, both hemispheres
470.1
2455
Male, age 74, both hemispheres
445.6
2160
Male, age 61, both hemispheres
435.8
Paramedian reticular nucleus nTPM: 586.0
2052
Male, age 76, both hemispheres
691.4
2050
Female, age 85, both hemispheres
569.8
2057
Male, age 80, both hemispheres
545.5
2313
Male, age 61, both hemispheres
537.3
Pedunculopontine tegmental nucleus nTPM: 571.9
2338
Male, age 61, both hemispheres
662.8
2334
Male, age 80, both hemispheres
620.9
1921
Female, age 85, both hemispheres
432.1
Pontine nuclei nTPM: 544.8
2319
Female, age 91, both hemispheres
671.7
1968
Male, age 76, left hemisphere
596.6
2115
Male, age 80, left hemisphere
586.2
1863
Male, age 55, unknown
545.8
2454
Male, age 74, left hemisphere
545.8
2109
Female, age 72, unknown
509.0
2787
Female, age 85, both hemispheres
453.4
2727
Male, age 61, right hemisphere
449.7
Pontine raphe nucleus nTPM: 495.5
2853
Male, age 76, midline
496.0
2122
Female, age 85, midline
495.0
Posteroventral cochlear nucleus nTPM: 676.6
2341
Male, age 80, both hemispheres
820.3
2135
Female, age 91, both hemispheres
784.0
2371
Male, age 61, both hemispheres
720.6
2752
Female, age 85, both hemispheres
540.8
2070
Male, age 76, both hemispheres
517.4
Principal sensory trigeminal nucleus nTPM: 517.1
2367
Female, age 91, left hemisphere
606.9
2324
Male, age 76, both hemispheres
517.1
2158
Male, age 61, both hemispheres
478.1
2008
Male, age 80, left hemisphere
466.3
Reticular pontine nucleus, caudal nTPM: 557.3
2457
Female, age 91, both hemispheres
604.8
2559
Male, age 74, both hemispheres
602.2
2092
Male, age 76, both hemispheres
587.0
2332
Male, age 80, right hemisphere
435.2
Reticular pontine nucleus, oral nTPM: 557.3
2366
Female, age 91, both hemispheres
668.5
1939
Male, age 80, both hemispheres
584.5
2167
Male, age 76, both hemispheres
558.8
2012
Female, age 85, both hemispheres
504.9
2361
Male, age 74, both hemispheres
469.7
Reticulotegmental nucleus nTPM: 579.8
2452
Male, age 74, both hemispheres
633.1
2322
Female, age 91, both hemispheres
622.1
2333
Male, age 80, both hemispheres
561.1
2325
Male, age 76, both hemispheres
502.9
Spinal trigeminal nucleus, oral nTPM: 486.5
2164
Male, age 80, both hemispheres
557.5
1978
Male, age 76, both hemispheres
487.7
2737
Female, age 85, both hemispheres
414.2
Subcoeruleus area nTPM: 550.3
2369
Female, age 85, left hemisphere
626.9
2451
Male, age 74, both hemispheres
615.4
1958
Male, age 80, both hemispheres
542.9
2089
Male, age 76, left hemisphere
488.8
2323
Female, age 91, left hemisphere
477.4
Superior olive nTPM: 567.9
2020
Male, age 76, both hemispheres
687.2
2561
Female, age 91, both hemispheres
650.4
2329
Male, age 80, right hemisphere
521.9
1875
Female, age 85, both hemispheres
490.2
2364
Male, age 74, right hemisphere
490.0
Ventral periolivary nuclei nTPM: 563.1
2023
Male, age 76, both hemispheres
677.5
2794
Female, age 91, left hemisphere
600.4
2165
Male, age 80, both hemispheres
510.0
2130
Female, age 85, both hemispheres
464.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 547.0
2840
Female, age 85, both hemispheres
599.0
2161
Male, age 80, both hemispheres
584.5
1959
Male, age 76, both hemispheres
579.8
2456
Female, age 91, both hemispheres
545.5
2359
Male, age 61, both hemispheres
541.2
2449
Male, age 74, both hemispheres
431.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
74.8
Pig sample
Sample description
nTPM
Pons nTPM: 74.8
Samples: 4
Max nTPM: 84.4
Min nTPM: 60.2
Sample A
Female
72.6
Sample B
Female
60.2
Sample C
Male
84.4
Sample D
Male
81.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
