HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:140.9 nTPM
HPA Brain:289.3 nTPM
GTEx:140.9 nTPM
FANTOM5:153.5 Scaled Tags Per Million
Pig:92.4 nTPM
Mouse:57.4 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 289.3
Sample id Sample description nTPM
Hippocampus
nTPM: 197.7
2529 Female, age 94, left hemisphere 245.0
1911 Female, age 85, right hemisphere 244.1
2621 Female, age 67, right hemisphere 196.8
1898 Male, age 80, left hemisphere 186.3
2148 Female, age 91, left hemisphere 157.0
1855 Male, age 76, left hemisphere 156.8
Dentate gyrus
nTPM: 199.5
2530 Female, age 94, left hemisphere 326.4
2010 Male, age 76, both hemispheres 220.7
2246 Female, age 85, both hemispheres 177.1
2531 Female, age 67, both hemispheres 174.3
2528 Male, age 74, both hemispheres 167.3
1927 Female, age 91, both hemispheres 130.9
Entorhinal gyrus
nTPM: 235.2
2117 Female, age 91, right hemisphere 322.6
2686 Male, age 75, right hemisphere 295.8
2764 Male, age 80, right hemisphere 223.3
2613 Female, age 94, left hemisphere 208.3
1938 Female, age 85, left hemisphere 196.1
1787 Male, age 76, left hemisphere 165.1
Hippocampus, CA1
nTPM: 156.7
1873 Female, age 85, both hemispheres 180.3
2082 Female, age 91, right hemisphere 176.7
2527 Male, age 74, both hemispheres 173.3
2749 Male, age 80, left hemisphere 152.7
2045 Male, age 76, both hemispheres 100.5
Hippocampus, CA2
nTPM: 197.7
1963 Male, age 80, left hemisphere 258.1
2437 Female, age 94, left hemisphere 222.2
2249 Male, age 74, both hemispheres 193.9
2113 Female, age 91, right hemisphere 189.7
1940 Female, age 85, left hemisphere 188.7
1892 Male, age 76, both hemispheres 133.4
Hippocampus, CA3
nTPM: 159.0
1891 Female, age 85, both hemispheres 292.6
1867 Male, age 76, both hemispheres 192.9
2137 Male, age 80, left hemisphere 145.8
2436 Male, age 74, both hemispheres 129.3
2861 Female, age 67, both hemispheres 105.0
2620 Female, age 94, left hemisphere 88.1
Parahippocampal cortex
nTPM: 191.2
2532 Female, age 72, left hemisphere 254.6
2692 Male, age 74, both hemispheres 254.5
2018 Male, age 76, both hemispheres 213.9
1990 Female, age 91, right hemisphere 202.8
1850 Male, age 80, both hemispheres 196.6
2245 Female, age 91, both hemispheres 188.3
1933 Female, age 85, both hemispheres 184.6
2693 Female, age 94, both hemispheres 155.7
2622 Female, age 67, right hemisphere 144.5
2250 Female, age 67, right hemisphere 116.5
Perirhinal gyrus
nTPM: 133.6
2848 Male, age 76, right hemisphere 145.3
1841 Female, age 85, right hemisphere 137.0
1847 Female, age 91, left hemisphere 136.3
2521 Female, age 94, right hemisphere 128.9
1794 Male, age 80, right hemisphere 120.4
Subiculum
nTPM: 289.3
2042 Male, age 76, both hemispheres 407.4
2438 Female, age 94, left hemisphere 369.4
1901 Male, age 80, both hemispheres 309.9
1977 Female, age 85, both hemispheres 271.1
2619 Male, age 74, both hemispheres 190.7
2729 Female, age 91, right hemisphere 187.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 140.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 140.9
Samples: 197

Max nTPM: 401.0
Min nTPM: 33.5
Std nTPM: 78.9
Median nTPM: 121.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 401.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 400.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 380.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 359.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 350.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 348.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 340.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 321.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 306.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 305.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 296.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.5
FF:10153-102I9 76 years, female 186.5
FF:10169-103B7 60 years, female 120.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.4
Pig sample Sample description nTPM
Subiculum
nTPM: 44.0
Samples: 4

Max nTPM: 51.5
Min nTPM: 36.4
Sample A Female 43.9
Sample B Female 51.5
Sample C Male 36.4
Sample D Male 44.0
Dorsal hippocampus
nTPM: 92.4
Samples: 4

Max nTPM: 130.4
Min nTPM: 42.9
Sample A Female 120.0
Sample B Female 76.4
Sample C Male 130.4
Sample D Male 42.9
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 48.8
Min nTPM: 27.5
Sample A Female 27.5
Sample B Female 48.8
Sample C Male 30.4
Sample D Male 37.7
Ventral hippocampus
nTPM: 62.6
Samples: 4

Max nTPM: 93.1
Min nTPM: 40.1
Sample A Female 63.7
Sample B Female 40.1
Sample C Male 53.6
Sample D Male 93.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 50.2
Min nTPM: 33.5
Sample A Male 50.2
Sample B Male 37.3
Sample C Female 36.4
Sample D Female 33.5
Hippocampal formation
nTPM: 57.4
Samples: 4

Max nTPM: 73.4
Min nTPM: 47.6
Sample A Male 47.6
Sample B Male 55.5
Sample C Female 73.4
Sample D Female 53.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
68080699 Antisense, RP_040929_01_F07, Mouse strain C57BL/6J (56 days, male) 17.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org