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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
490.2
nTPM
FANTOM5:
317.4
Scaled Tags Per Million
Pig:
112.0
nTPM
Allen mouse:
14.2
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
490.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 432.5
2188
Female, age 91, both hemispheres
542.3
2090
Male, age 80, both hemispheres
477.3
2301
Female, age 85, both hemispheres
469.2
1984
Male, age 76, both hemispheres
241.3
Dorsal cochlear nucleus nTPM: 405.8
2187
Female, age 91, both hemispheres
441.6
2378
Male, age 80, both hemispheres
436.6
2058
Male, age 76, both hemispheres
403.4
2802
Male, age 74, right hemisphere
386.8
2370
Male, age 61, both hemispheres
360.6
Dorsal tegmental nucleus nTPM: 351.2
2083
Male, age 80, both hemispheres
441.2
2326
Male, age 74, both hemispheres
379.6
1936
Male, age 76, left hemisphere
294.2
2358
Male, age 61, both hemispheres
289.7
Dorsolateral tegmental area nTPM: 349.6
2751
Female, age 85, both hemispheres
493.8
2654
Male, age 80, both hemispheres
438.8
2337
Male, age 61, both hemispheres
377.2
2360
Male, age 74, both hemispheres
246.0
2141
Male, age 76, both hemispheres
192.0
Kolliker-Fuse nucleus nTPM: 389.4
2793
Female, age 91, left hemisphere
580.4
2163
Male, age 80, both hemispheres
354.5
2315
Male, age 76, right hemisphere
233.2
Lateral lemniscal nuclei nTPM: 364.6
2320
Female, age 91, left hemisphere
475.6
2036
Male, age 80, both hemispheres
385.6
2746
Female, age 85, left hemisphere
345.5
2453
Male, age 74, right hemisphere
332.5
2169
Male, age 76, both hemispheres
283.8
Lateral parabrachial nucleus nTPM: 401.1
2792
Male, age 76, both hemispheres
557.9
2013
Male, age 80, both hemispheres
412.4
2790
Male, age 61, both hemispheres
370.5
2139
Female, age 85, right hemisphere
263.7
Lateral vestibular nucleus nTPM: 367.9
2311
Male, age 80, both hemispheres
408.3
2184
Male, age 76, both hemispheres
327.4
Locus coeruleus nTPM: 216.4
2720
Male, age 74, both hemispheres
312.0
2162
Male, age 80, both hemispheres
273.1
2317
Female, age 72, unknown
221.2
2788
Male, age 74, unknown
211.9
2014
Male, age 55, unknown
191.9
2123
Female, age 91, both hemispheres
172.5
1980
Male, age 76, both hemispheres
132.0
Medial parabrachial nucleus nTPM: 395.9
2170
Female, age 91, both hemispheres
464.6
2854
Male, age 80, both hemispheres
431.1
2463
Female, age 85, right hemisphere
405.8
2786
Male, age 76, both hemispheres
352.7
2156
Male, age 61, both hemispheres
325.4
Medial periolivary nuclei nTPM: 353.1
2081
Male, age 80, both hemispheres
462.2
2458
Female, age 91, both hemispheres
453.6
2791
Male, age 74, right hemisphere
328.6
2063
Male, age 76, both hemispheres
287.5
2171
Female, age 85, both hemispheres
233.4
Motor facial nucleus nTPM: 364.4
2697
Female, age 85, both hemispheres
459.4
2126
Male, age 61, both hemispheres
405.3
2795
Female, age 91, both hemispheres
379.4
2365
Male, age 74, right hemisphere
346.1
2327
Male, age 80, both hemispheres
339.6
2062
Male, age 76, both hemispheres
256.6
Motor trigeminal nucleus nTPM: 371.5
2321
Female, age 91, both hemispheres
461.3
2309
Male, age 76, both hemispheres
395.5
2560
Male, age 74, both hemispheres
384.1
2079
Male, age 80, both hemispheres
321.3
2335
Male, age 61, both hemispheres
295.5
Nuclei of the trapezoid body nTPM: 312.3
2166
Male, age 80, both hemispheres
419.9
2368
Female, age 91, both hemispheres
408.8
1983
Male, age 76, both hemispheres
265.2
2159
Male, age 61, both hemispheres
263.2
2735
Female, age 85, both hemispheres
204.6
Nucleus raphe magnus nTPM: 319.7
2459
Female, age 91, both hemispheres
476.7
2051
Male, age 76, both hemispheres
390.5
2328
Male, age 80, both hemispheres
382.7
2455
Male, age 74, both hemispheres
291.6
2172
Female, age 85, both hemispheres
195.4
2160
Male, age 61, both hemispheres
181.3
Paramedian reticular nucleus nTPM: 400.1
2052
Male, age 76, both hemispheres
565.2
2057
Male, age 80, both hemispheres
376.4
2050
Female, age 85, both hemispheres
346.4
2313
Male, age 61, both hemispheres
312.5
Pedunculopontine tegmental nucleus nTPM: 358.9
2338
Male, age 61, both hemispheres
408.1
2334
Male, age 80, both hemispheres
374.8
1921
Female, age 85, both hemispheres
293.7
Pontine nuclei nTPM: 389.3
2319
Female, age 91, both hemispheres
564.1
2454
Male, age 74, left hemisphere
504.9
2109
Female, age 72, unknown
412.9
2115
Male, age 80, left hemisphere
390.9
1863
Male, age 55, unknown
381.8
1968
Male, age 76, left hemisphere
342.4
2727
Male, age 61, right hemisphere
270.8
2787
Female, age 85, both hemispheres
246.5
Pontine raphe nucleus nTPM: 281.7
2122
Female, age 85, midline
293.6
2853
Male, age 76, midline
269.8
Posteroventral cochlear nucleus nTPM: 490.2
2135
Female, age 91, both hemispheres
614.0
2341
Male, age 80, both hemispheres
597.2
2070
Male, age 76, both hemispheres
489.3
2371
Male, age 61, both hemispheres
456.1
2752
Female, age 85, both hemispheres
294.4
Principal sensory trigeminal nucleus nTPM: 338.4
2367
Female, age 91, left hemisphere
526.1
2324
Male, age 76, both hemispheres
307.8
2008
Male, age 80, left hemisphere
289.5
2158
Male, age 61, both hemispheres
230.0
Reticular pontine nucleus, caudal nTPM: 410.9
2457
Female, age 91, both hemispheres
529.8
2559
Male, age 74, both hemispheres
450.0
2092
Male, age 76, both hemispheres
357.8
2332
Male, age 80, right hemisphere
306.1
Reticular pontine nucleus, oral nTPM: 445.3
2366
Female, age 91, both hemispheres
596.2
1939
Male, age 80, both hemispheres
438.7
2361
Male, age 74, both hemispheres
403.5
2167
Male, age 76, both hemispheres
402.2
2012
Female, age 85, both hemispheres
386.2
Reticulotegmental nucleus nTPM: 358.3
2322
Female, age 91, both hemispheres
436.4
2452
Male, age 74, both hemispheres
384.5
2333
Male, age 80, both hemispheres
371.7
2325
Male, age 76, both hemispheres
240.6
Spinal trigeminal nucleus, oral nTPM: 327.9
1978
Male, age 76, both hemispheres
365.3
2164
Male, age 80, both hemispheres
364.1
2737
Female, age 85, both hemispheres
254.4
Subcoeruleus area nTPM: 371.0
2369
Female, age 85, left hemisphere
591.0
1958
Male, age 80, both hemispheres
353.8
2451
Male, age 74, both hemispheres
337.9
2089
Male, age 76, left hemisphere
303.2
2323
Female, age 91, left hemisphere
268.9
Superior olive nTPM: 383.4
2020
Male, age 76, both hemispheres
429.4
2561
Female, age 91, both hemispheres
416.0
2329
Male, age 80, right hemisphere
405.9
2364
Male, age 74, right hemisphere
342.6
1875
Female, age 85, both hemispheres
322.9
Ventral periolivary nuclei nTPM: 347.4
2023
Male, age 76, both hemispheres
466.0
2794
Female, age 91, left hemisphere
370.7
2165
Male, age 80, both hemispheres
325.8
2130
Female, age 85, both hemispheres
227.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 394.0
2456
Female, age 91, both hemispheres
467.5
2840
Female, age 85, both hemispheres
421.0
2359
Male, age 61, both hemispheres
388.8
1959
Male, age 76, both hemispheres
382.2
2161
Male, age 80, both hemispheres
381.6
2449
Male, age 74, both hemispheres
322.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
112.0
Pig sample
Sample description
nTPM
Pons nTPM: 112.0
Samples: 4
Max nTPM: 163.0
Min nTPM: 79.4
Sample A
Female
79.4
Sample B
Female
92.4
Sample C
Male
113.2
Sample D
Male
163.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
