HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.3 nTPM
HPA Brain:34.4 nTPM
GTEx:28.3 nTPM
FANTOM5:17.2 Scaled Tags Per Million
Pig:97.4 nTPM
Mouse:214.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002807Antibody CAB002753
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
2529 Female, age 94, left hemisphere 37.2
2621 Female, age 67, right hemisphere 36.1
1911 Female, age 85, right hemisphere 34.1
2148 Female, age 91, left hemisphere 25.0
1855 Male, age 76, left hemisphere 22.9
1898 Male, age 80, left hemisphere 19.0
Dentate gyrus
nTPM: 26.6
2528 Male, age 74, both hemispheres 28.8
1927 Female, age 91, both hemispheres 28.1
2246 Female, age 85, both hemispheres 27.9
2530 Female, age 94, left hemisphere 27.7
2010 Male, age 76, both hemispheres 23.7
2531 Female, age 67, both hemispheres 23.3
Entorhinal gyrus
nTPM: 27.9
2686 Male, age 75, right hemisphere 37.4
1938 Female, age 85, left hemisphere 33.3
2117 Female, age 91, right hemisphere 29.1
1787 Male, age 76, left hemisphere 22.9
2764 Male, age 80, right hemisphere 22.5
2613 Female, age 94, left hemisphere 22.3
Hippocampus, CA1
nTPM: 25.4
2527 Male, age 74, both hemispheres 36.2
1873 Female, age 85, both hemispheres 28.4
2082 Female, age 91, right hemisphere 25.2
2045 Male, age 76, both hemispheres 18.9
2749 Male, age 80, left hemisphere 18.5
Hippocampus, CA2
nTPM: 29.6
2249 Male, age 74, both hemispheres 37.5
2113 Female, age 91, right hemisphere 32.8
2437 Female, age 94, left hemisphere 30.6
1940 Female, age 85, left hemisphere 26.9
1963 Male, age 80, left hemisphere 26.0
1892 Male, age 76, both hemispheres 24.0
Hippocampus, CA3
nTPM: 29.5
2436 Male, age 74, both hemispheres 45.6
2861 Female, age 67, both hemispheres 34.1
1867 Male, age 76, both hemispheres 33.1
1891 Female, age 85, both hemispheres 29.4
2137 Male, age 80, left hemisphere 18.6
2620 Female, age 94, left hemisphere 16.2
Parahippocampal cortex
nTPM: 34.4
2622 Female, age 67, right hemisphere 43.5
2250 Female, age 67, right hemisphere 42.5
2692 Male, age 74, both hemispheres 37.1
1933 Female, age 85, both hemispheres 36.7
2245 Female, age 91, both hemispheres 35.4
2018 Male, age 76, both hemispheres 34.4
2532 Female, age 72, left hemisphere 31.1
1990 Female, age 91, right hemisphere 30.6
2693 Female, age 94, both hemispheres 30.6
1850 Male, age 80, both hemispheres 21.5
Perirhinal gyrus
nTPM: 28.1
1841 Female, age 85, right hemisphere 38.8
2521 Female, age 94, right hemisphere 31.1
1847 Female, age 91, left hemisphere 27.9
1794 Male, age 80, right hemisphere 22.5
2848 Male, age 76, right hemisphere 20.4
Subiculum
nTPM: 30.5
2438 Female, age 94, left hemisphere 37.8
2619 Male, age 74, both hemispheres 36.4
2042 Male, age 76, both hemispheres 33.9
2729 Female, age 91, right hemisphere 25.7
1901 Male, age 80, both hemispheres 25.1
1977 Female, age 85, both hemispheres 24.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 80.1
Min nTPM: 8.7
Std nTPM: 12.2
Median nTPM: 26.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 80.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 75.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 68.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 64.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 56.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 55.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 53.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 52.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 51.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 50.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 50.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.2
FF:10153-102I9 76 years, female 25.1
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 97.4
Pig sample Sample description nTPM
Subiculum
nTPM: 97.4
Samples: 4

Max nTPM: 110.1
Min nTPM: 80.8
Sample A Female 110.1
Sample B Female 93.6
Sample C Male 105.1
Sample D Male 80.8
Dorsal hippocampus
nTPM: 64.9
Samples: 4

Max nTPM: 68.7
Min nTPM: 62.0
Sample A Female 62.0
Sample B Female 65.7
Sample C Male 68.7
Sample D Male 63.3
Entorhinal cortex
nTPM: 85.5
Samples: 4

Max nTPM: 101.7
Min nTPM: 70.4
Sample A Female 83.2
Sample B Female 86.5
Sample C Male 101.7
Sample D Male 70.4
Ventral hippocampus
nTPM: 87.7
Samples: 4

Max nTPM: 132.5
Min nTPM: 71.3
Sample A Female 75.7
Sample B Female 71.3
Sample C Male 132.5
Sample D Male 71.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 214.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 214.8
Samples: 4

Max nTPM: 247.3
Min nTPM: 192.4
Sample A Male 205.0
Sample B Male 192.4
Sample C Female 214.3
Sample D Female 247.3
Hippocampal formation
nTPM: 149.8
Samples: 4

Max nTPM: 176.9
Min nTPM: 114.5
Sample A Male 167.2
Sample B Male 140.4
Sample C Female 114.5
Sample D Female 176.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
71763474 Antisense, RP_050921_02_A07, Mouse strain C57BL/6J (56 days, male) 2.8

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