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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
225.4
nTPM
GTEx:
225.4
nTPM
FANTOM5:
243.7
Scaled Tags Per Million
Pig:
99.3
nTPM
Mouse:
401.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
225.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 225.4
Samples: 105
Max nTPM: 555.4
Min nTPM: 55.0
Std nTPM: 107.4
Median nTPM:
352_1
62 years, male
555.4
172_1
72 years, female
525.3
218_1
71 years, female
473.8
349_1
83 years, male
438.4
243_1
75 years, male
417.9
355_1
70 years, female
417.6
354_1
81 years, female
403.5
321_1
62 years, female
398.6
319_1
81 years, male
391.9
356_1
87 years, female
382.2
237_1
82 years, male
377.9
350_1
84 years, female
363.4
353_1
82 years, female
363.4
386_1
76 years, male
361.7
335_1
73 years, female
359.1
286_1
68 years, female
356.8
375_1
74 years, female
343.7
163_1
78 years, male
341.1
394_1
75 years, female
340.2
177_1
74 years, male
325.0
347_1
72 years, male
314.2
447_1
81 years, male
309.8
389_1
86 years, female
307.9
376_1
75 years, female
300.6
425_1
59 years, female
295.4
229_1
69 years, female
294.0
379_1
60 years, male
290.5
292_1
71 years, male
287.5
526_1
61 years, male
278.1
503_1
68 years, male
277.3
318_1
68 years, male
276.6
377_1
82 years, female
273.6
351_1
91 years, male
269.5
291_1
76 years, male
267.1
266_1
85 years, male
257.0
480_1
63 years, male
257.0
404_1
82 years, female
254.7
316_1
62 years, male
253.6
406_1
79 years, male
250.5
320_1
89 years, female
249.1
6_1
73 years, female
244.4
99_1
64 years, male
243.2
115_1
83 years, male
238.9
506_1
65 years, male
232.4
468_1
89 years, male
226.8
251_1
78 years, male
226.5
517_1
88 years, male
225.9
293_1
68 years, female
222.1
396_1
62 years, male
222.0
189_1
76 years, male
221.9
153_1
70 years, female
218.1
217_1
76 years, male
217.1
384_1
83 years, male
215.6
405_1
91 years, male
211.7
499_1
55 years, female
211.1
265_1
87 years, male
203.7
246_1
77 years, male
198.8
317_1
60 years, male
197.8
9_1
66 years, female
197.4
295_1
61 years, female
196.8
348_1
84 years, male
192.4
313_1
79 years, female
187.8
324_1
76 years, male
186.5
173_1
67 years, male
181.8
311_1
78 years, male
177.7
264_1
73 years, female
176.1
42_1
85 years, male
168.6
35_1
74 years, female
168.2
452_1
88 years, female
166.2
142_1
61 years, female
161.1
415_1
77 years, female
160.2
126_1
63 years, male
152.5
145_1
84 years, male
151.0
117_1
61 years, male
149.3
254_1
77 years, female
148.9
18_1
88 years, male
145.4
109_1
81 years, female
145.0
32_1
67 years, male
142.4
322_1
76 years, male
141.7
137_1
83 years, male
138.1
466_1
57 years, female
137.8
81_1
67 years, male
137.0
518_1
75 years, female
135.7
414_1
84 years, female
134.7
315_1
62 years, female
131.8
314_1
67 years, male
130.1
120_1
70 years, female
126.9
41_1
94 years, female
121.3
162_1
79 years, female
117.2
43_1
64 years, female
112.4
490_1
67 years, female
108.0
307_1
66 years, female
105.6
288_1
66 years, female
103.4
119_1
70 years, female
100.6
4_1
88 years, female
99.2
17_1
71 years, male
97.4
413_1
59 years, female
89.5
149_1
88 years, male
89.1
139_1
64 years, female
79.4
2_1
77 years, female
79.2
89_1
63 years, male
73.6
491_1
89 years, female
67.3
495_1
57 years, female
64.9
501_1
88 years, male
55.7
308_1
70 years, female
55.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.