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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
35.1
nTPM
HPA Brain:
40.1
nTPM
GTEx:
35.1
nTPM
FANTOM5:
20.8
Scaled Tags Per Million
Pig:
89.5
nTPM
Mouse:
241.5
nTPM
Allen mouse:
3.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
40.1
Sample id
Sample description
nTPM
Amygdala nTPM: 40.1
2514
Male, age 75, right hemisphere
47.8
1987
Female, age 91, left hemisphere
42.4
2814
Male, age 76, right hemisphere
40.4
2695
Female, age 67, right hemisphere
38.4
2517
Female, age 94, left hemisphere
31.6
Basal amygdala nTPM: 30.0
2609
Male, age 75, right hemisphere
51.0
2827
Female, age 67, right hemisphere
27.6
1955
Male, age 76, both hemispheres
27.4
2243
Female, age 91, right hemisphere
27.2
2685
Female, age 94, left hemisphere
26.3
2110
Male, age 80, left hemisphere
20.5
Central amygdala nTPM: 33.1
1905
Male, age 76, both hemispheres
39.2
2515
Male, age 75, right hemisphere
38.4
2826
Female, age 94, left hemisphere
31.4
2701
Female, age 91, right hemisphere
28.6
2239
Male, age 80, left hemisphere
27.8
Corticomedial amygdala nTPM: 32.5
2428
Male, age 75, right hemisphere
46.7
2242
Female, age 91, right hemisphere
45.3
2429
Female, age 94, left hemisphere
35.1
2535
Female, age 67, right hemisphere
24.0
2240
Male, age 76, both hemispheres
22.5
2829
Male, age 80, left hemisphere
21.6
Lateral amygdala nTPM: 36.2
2516
Male, age 75, right hemisphere
51.0
1883
Male, age 76, both hemispheres
40.1
2830
Female, age 67, right hemisphere
35.2
2255
Female, age 91, right hemisphere
35.0
2256
Male, age 80, left hemisphere
29.1
2534
Female, age 94, left hemisphere
27.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
35.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 35.1
Samples: 152
Max nTPM: 120.3
Min nTPM: 9.3
Std nTPM: 15.7
Median nTPM: 33.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
120.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
95.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
90.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
82.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
76.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
65.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
60.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
58.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
57.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
55.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
54.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
52.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
50.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
49.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
49.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
49.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
49.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
48.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
48.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
48.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
46.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
45.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
45.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
44.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
43.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
43.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
43.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
42.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
42.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
41.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
41.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
40.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
40.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
40.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
39.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
39.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
39.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
39.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
38.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
38.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
38.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
38.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
38.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
38.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
38.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
38.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
37.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
37.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
37.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
37.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
36.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
36.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
35.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
35.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
35.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
35.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
35.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
35.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
34.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
34.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
34.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
34.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
34.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
34.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
33.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
33.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
33.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
33.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
32.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
32.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
31.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
31.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
31.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
30.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
30.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
30.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
29.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
29.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
29.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
29.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
29.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
28.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
28.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
28.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
28.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
28.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
27.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
27.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
27.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
27.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
26.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
26.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
26.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
26.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
26.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
26.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
26.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
26.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
25.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
25.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
25.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
25.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
23.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
23.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
23.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
23.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
22.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
22.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
21.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
21.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
21.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
21.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
20.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
20.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
20.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
19.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
19.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
19.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
19.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
18.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
18.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
18.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
17.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
17.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
17.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
17.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
17.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
16.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
16.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
16.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
14.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
13.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
12.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
9.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
9.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
241.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 241.5
Samples: 4
Max nTPM: 258.7
Min nTPM: 220.2
Sample A
Male
220.2
Sample B
Male
237.2
Sample C
Female
249.8
Sample D
Female
258.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.