HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:1243.9 nTPM
HPA Brain:408.6 nTPM
GTEx:1243.9 nTPM
FANTOM5:24.9 Scaled Tags Per Million
Pig:220.3 nTPM
Mouse:794.9 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047501Antibody HPA051994
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 408.6
Sample id Sample description nTPM
Hippocampus
nTPM: 402.6
2621 Female, age 67, right hemisphere 455.7
2529 Female, age 94, left hemisphere 453.6
1898 Male, age 80, left hemisphere 416.5
1911 Female, age 85, right hemisphere 395.0
1855 Male, age 76, left hemisphere 382.8
2148 Female, age 91, left hemisphere 312.2
Dentate gyrus
nTPM: 395.0
2530 Female, age 94, left hemisphere 474.7
2010 Male, age 76, both hemispheres 446.3
2246 Female, age 85, both hemispheres 399.1
2531 Female, age 67, both hemispheres 385.2
2528 Male, age 74, both hemispheres 344.8
1927 Female, age 91, both hemispheres 320.2
Entorhinal gyrus
nTPM: 367.6
2686 Male, age 75, right hemisphere 424.5
1787 Male, age 76, left hemisphere 405.6
1938 Female, age 85, left hemisphere 358.0
2764 Male, age 80, right hemisphere 356.3
2117 Female, age 91, right hemisphere 345.3
2613 Female, age 94, left hemisphere 316.2
Hippocampus, CA1
nTPM: 366.5
2045 Male, age 76, both hemispheres 414.8
1873 Female, age 85, both hemispheres 369.8
2082 Female, age 91, right hemisphere 365.8
2527 Male, age 74, both hemispheres 346.2
2749 Male, age 80, left hemisphere 335.8
Hippocampus, CA2
nTPM: 371.3
1963 Male, age 80, left hemisphere 435.4
1892 Male, age 76, both hemispheres 392.2
2437 Female, age 94, left hemisphere 390.8
2113 Female, age 91, right hemisphere 352.6
2249 Male, age 74, both hemispheres 335.5
1940 Female, age 85, left hemisphere 321.5
Hippocampus, CA3
nTPM: 342.7
1867 Male, age 76, both hemispheres 414.0
1891 Female, age 85, both hemispheres 397.8
2861 Female, age 67, both hemispheres 340.7
2137 Male, age 80, left hemisphere 324.1
2436 Male, age 74, both hemispheres 307.7
2620 Female, age 94, left hemisphere 271.7
Parahippocampal cortex
nTPM: 367.9
2018 Male, age 76, both hemispheres 519.5
2250 Female, age 67, right hemisphere 407.3
2532 Female, age 72, left hemisphere 395.6
1850 Male, age 80, both hemispheres 373.0
2245 Female, age 91, both hemispheres 355.4
1933 Female, age 85, both hemispheres 350.6
1990 Female, age 91, right hemisphere 342.8
2692 Male, age 74, both hemispheres 339.7
2693 Female, age 94, both hemispheres 303.1
2622 Female, age 67, right hemisphere 292.2
Perirhinal gyrus
nTPM: 399.2
1841 Female, age 85, right hemisphere 430.6
1847 Female, age 91, left hemisphere 430.0
2848 Male, age 76, right hemisphere 405.6
1794 Male, age 80, right hemisphere 385.9
2521 Female, age 94, right hemisphere 344.0
Subiculum
nTPM: 408.6
2042 Male, age 76, both hemispheres 483.6
2438 Female, age 94, left hemisphere 477.4
1977 Female, age 85, both hemispheres 453.0
1901 Male, age 80, both hemispheres 368.9
2729 Female, age 91, right hemisphere 347.4
2619 Male, age 74, both hemispheres 320.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1243.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1243.9
Samples: 197

Max nTPM: 3509.8
Min nTPM: 559.6
Std nTPM: 464.1
Median nTPM: 1127.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3509.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2891.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2725.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2719.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2602.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2483.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2401.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2280.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2255.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2235.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2152.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.9
FF:10153-102I9 76 years, female 26.9
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 220.3
Pig sample Sample description nTPM
Subiculum
nTPM: 179.8
Samples: 4

Max nTPM: 250.8
Min nTPM: 143.5
Sample A Female 250.8
Sample B Female 177.9
Sample C Male 147.0
Sample D Male 143.5
Dorsal hippocampus
nTPM: 220.3
Samples: 4

Max nTPM: 290.6
Min nTPM: 154.1
Sample A Female 290.6
Sample B Female 207.2
Sample C Male 229.4
Sample D Male 154.1
Entorhinal cortex
nTPM: 183.6
Samples: 4

Max nTPM: 217.4
Min nTPM: 139.9
Sample A Female 160.7
Sample B Female 217.4
Sample C Male 216.2
Sample D Male 139.9
Ventral hippocampus
nTPM: 188.7
Samples: 4

Max nTPM: 201.6
Min nTPM: 172.5
Sample A Female 182.2
Sample B Female 172.5
Sample C Male 198.5
Sample D Male 201.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 794.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 775.5
Samples: 4

Max nTPM: 842.1
Min nTPM: 746.3
Sample A Male 765.3
Sample B Male 748.1
Sample C Female 842.1
Sample D Female 746.3
Hippocampal formation
nTPM: 794.9
Samples: 4

Max nTPM: 945.5
Min nTPM: 720.2
Sample A Male 945.5
Sample B Male 738.0
Sample C Female 720.2
Sample D Female 775.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
75934920 Antisense, RP_060530_01_E12, Mouse strain C57BL/6J (56 days, male) 9.1
69012729 Antisense, RP_050309_01_D03, Mouse strain C57BL/6J (56 days, male) 1.4

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