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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
504.7
nTPM
FANTOM5:
31.6
Scaled Tags Per Million
Pig:
217.4
nTPM
Allen mouse:
4.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
504.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 504.7
2301
Female, age 85, both hemispheres
581.3
2188
Female, age 91, both hemispheres
549.6
2090
Male, age 80, both hemispheres
527.2
1984
Male, age 76, both hemispheres
360.6
Dorsal cochlear nucleus nTPM: 465.9
2187
Female, age 91, both hemispheres
525.1
2370
Male, age 61, both hemispheres
493.0
2378
Male, age 80, both hemispheres
483.0
2802
Male, age 74, right hemisphere
469.6
2058
Male, age 76, both hemispheres
358.6
Dorsal tegmental nucleus nTPM: 469.5
2326
Male, age 74, both hemispheres
513.9
2358
Male, age 61, both hemispheres
498.1
2083
Male, age 80, both hemispheres
480.9
1936
Male, age 76, left hemisphere
385.2
Dorsolateral tegmental area nTPM: 484.1
2654
Male, age 80, both hemispheres
573.7
2337
Male, age 61, both hemispheres
560.9
2751
Female, age 85, both hemispheres
481.4
2360
Male, age 74, both hemispheres
446.4
2141
Male, age 76, both hemispheres
358.2
Kolliker-Fuse nucleus nTPM: 491.2
2793
Female, age 91, left hemisphere
534.2
2315
Male, age 76, right hemisphere
496.7
2163
Male, age 80, both hemispheres
442.7
Lateral lemniscal nuclei nTPM: 393.6
2169
Male, age 76, both hemispheres
430.3
2320
Female, age 91, left hemisphere
421.1
2746
Female, age 85, left hemisphere
395.3
2036
Male, age 80, both hemispheres
379.6
2453
Male, age 74, right hemisphere
341.6
Lateral parabrachial nucleus nTPM: 494.2
2792
Male, age 76, both hemispheres
630.9
2013
Male, age 80, both hemispheres
548.0
2139
Female, age 85, right hemisphere
412.2
2790
Male, age 61, both hemispheres
385.8
Lateral vestibular nucleus nTPM: 425.1
2311
Male, age 80, both hemispheres
503.4
2184
Male, age 76, both hemispheres
346.8
Locus coeruleus nTPM: 379.1
2720
Male, age 74, both hemispheres
484.7
2162
Male, age 80, both hemispheres
434.8
2123
Female, age 91, both hemispheres
399.2
2014
Male, age 55, unknown
377.3
1980
Male, age 76, both hemispheres
333.1
2317
Female, age 72, unknown
328.6
2788
Male, age 74, unknown
296.2
Medial parabrachial nucleus nTPM: 465.5
2170
Female, age 91, both hemispheres
595.8
2854
Male, age 80, both hemispheres
512.7
2463
Female, age 85, right hemisphere
423.8
2786
Male, age 76, both hemispheres
401.3
2156
Male, age 61, both hemispheres
393.8
Medial periolivary nuclei nTPM: 391.5
2458
Female, age 91, both hemispheres
436.8
2063
Male, age 76, both hemispheres
426.7
2081
Male, age 80, both hemispheres
411.1
2791
Male, age 74, right hemisphere
357.7
2171
Female, age 85, both hemispheres
325.2
Motor facial nucleus nTPM: 401.8
2697
Female, age 85, both hemispheres
472.7
2365
Male, age 74, right hemisphere
422.0
2126
Male, age 61, both hemispheres
408.5
2795
Female, age 91, both hemispheres
407.6
2062
Male, age 76, both hemispheres
381.2
2327
Male, age 80, both hemispheres
318.6
Motor trigeminal nucleus nTPM: 412.7
2321
Female, age 91, both hemispheres
464.3
2560
Male, age 74, both hemispheres
441.4
2335
Male, age 61, both hemispheres
424.6
2309
Male, age 76, both hemispheres
396.7
2079
Male, age 80, both hemispheres
336.7
Nuclei of the trapezoid body nTPM: 388.2
1983
Male, age 76, both hemispheres
443.4
2166
Male, age 80, both hemispheres
413.0
2159
Male, age 61, both hemispheres
395.6
2368
Female, age 91, both hemispheres
392.9
2735
Female, age 85, both hemispheres
296.4
Nucleus raphe magnus nTPM: 373.7
2051
Male, age 76, both hemispheres
428.8
2459
Female, age 91, both hemispheres
408.1
2328
Male, age 80, both hemispheres
377.3
2455
Male, age 74, both hemispheres
371.7
2160
Male, age 61, both hemispheres
338.2
2172
Female, age 85, both hemispheres
318.4
Paramedian reticular nucleus nTPM: 434.2
2052
Male, age 76, both hemispheres
475.4
2313
Male, age 61, both hemispheres
441.8
2050
Female, age 85, both hemispheres
414.6
2057
Male, age 80, both hemispheres
405.0
Pedunculopontine tegmental nucleus nTPM: 428.9
2338
Male, age 61, both hemispheres
478.7
2334
Male, age 80, both hemispheres
464.2
1921
Female, age 85, both hemispheres
343.9
Pontine nuclei nTPM: 416.3
2319
Female, age 91, both hemispheres
531.2
2454
Male, age 74, left hemisphere
443.3
1968
Male, age 76, left hemisphere
425.2
1863
Male, age 55, unknown
414.3
2115
Male, age 80, left hemisphere
411.3
2787
Female, age 85, both hemispheres
379.5
2109
Female, age 72, unknown
372.7
2727
Male, age 61, right hemisphere
353.1
Pontine raphe nucleus nTPM: 380.8
2853
Male, age 76, midline
383.2
2122
Female, age 85, midline
378.5
Posteroventral cochlear nucleus nTPM: 493.4
2341
Male, age 80, both hemispheres
557.0
2135
Female, age 91, both hemispheres
551.8
2371
Male, age 61, both hemispheres
537.6
2752
Female, age 85, both hemispheres
420.3
2070
Male, age 76, both hemispheres
400.4
Principal sensory trigeminal nucleus nTPM: 382.3
2367
Female, age 91, left hemisphere
457.8
2158
Male, age 61, both hemispheres
379.4
2324
Male, age 76, both hemispheres
369.6
2008
Male, age 80, left hemisphere
322.5
Reticular pontine nucleus, caudal nTPM: 408.5
2559
Male, age 74, both hemispheres
471.7
2457
Female, age 91, both hemispheres
435.2
2092
Male, age 76, both hemispheres
425.4
2332
Male, age 80, right hemisphere
301.7
Reticular pontine nucleus, oral nTPM: 452.6
2366
Female, age 91, both hemispheres
527.5
2167
Male, age 76, both hemispheres
465.7
1939
Male, age 80, both hemispheres
453.4
2361
Male, age 74, both hemispheres
425.9
2012
Female, age 85, both hemispheres
390.3
Reticulotegmental nucleus nTPM: 415.5
2452
Male, age 74, both hemispheres
476.1
2322
Female, age 91, both hemispheres
426.8
2333
Male, age 80, both hemispheres
398.4
2325
Male, age 76, both hemispheres
360.8
Spinal trigeminal nucleus, oral nTPM: 370.0
1978
Male, age 76, both hemispheres
386.6
2164
Male, age 80, both hemispheres
381.2
2737
Female, age 85, both hemispheres
342.0
Subcoeruleus area nTPM: 428.1
2451
Male, age 74, both hemispheres
508.5
2369
Female, age 85, left hemisphere
490.9
2323
Female, age 91, left hemisphere
413.5
1958
Male, age 80, both hemispheres
392.8
2089
Male, age 76, left hemisphere
334.6
Superior olive nTPM: 415.3
2020
Male, age 76, both hemispheres
481.4
2561
Female, age 91, both hemispheres
454.7
2364
Male, age 74, right hemisphere
434.5
2329
Male, age 80, right hemisphere
360.4
1875
Female, age 85, both hemispheres
345.4
Ventral periolivary nuclei nTPM: 398.9
2023
Male, age 76, both hemispheres
477.0
2794
Female, age 91, left hemisphere
409.0
2165
Male, age 80, both hemispheres
354.9
2130
Female, age 85, both hemispheres
354.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 409.4
2840
Female, age 85, both hemispheres
462.7
2456
Female, age 91, both hemispheres
438.4
2161
Male, age 80, both hemispheres
423.9
2359
Male, age 61, both hemispheres
416.1
1959
Male, age 76, both hemispheres
378.7
2449
Male, age 74, both hemispheres
336.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
217.4
Pig sample
Sample description
nTPM
Pons nTPM: 217.4
Samples: 4
Max nTPM: 258.0
Min nTPM: 166.1
Sample A
Female
220.5
Sample B
Female
166.1
Sample C
Male
258.0
Sample D
Male
225.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
