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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.5
nTPM
HPA Brain:
47.5
nTPM
GTEx:
11.5
nTPM
FANTOM5:
36.9
Scaled Tags Per Million
Pig:
45.3
nTPM
Mouse:
19.1
nTPM
Allen mouse:
1.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
47.5
Sample id
Sample description
nTPM
Amygdala nTPM: 47.5
2695
Female, age 67, right hemisphere
59.0
2814
Male, age 76, right hemisphere
56.0
2514
Male, age 75, right hemisphere
45.5
2517
Female, age 94, left hemisphere
41.1
1987
Female, age 91, left hemisphere
35.8
Basal amygdala nTPM: 44.2
1955
Male, age 76, both hemispheres
50.2
2110
Male, age 80, left hemisphere
47.6
2609
Male, age 75, right hemisphere
45.7
2685
Female, age 94, left hemisphere
43.8
2827
Female, age 67, right hemisphere
43.5
2243
Female, age 91, right hemisphere
34.4
Central amygdala nTPM: 45.6
2826
Female, age 94, left hemisphere
64.0
1905
Male, age 76, both hemispheres
46.4
2239
Male, age 80, left hemisphere
42.1
2515
Male, age 75, right hemisphere
40.4
2701
Female, age 91, right hemisphere
35.3
Corticomedial amygdala nTPM: 40.8
2429
Female, age 94, left hemisphere
52.2
2240
Male, age 76, both hemispheres
49.1
2428
Male, age 75, right hemisphere
42.4
2829
Male, age 80, left hemisphere
40.3
2535
Female, age 67, right hemisphere
31.6
2242
Female, age 91, right hemisphere
29.3
Lateral amygdala nTPM: 44.3
2830
Female, age 67, right hemisphere
57.4
2516
Male, age 75, right hemisphere
54.5
2534
Female, age 94, left hemisphere
48.4
1883
Male, age 76, both hemispheres
45.9
2256
Male, age 80, left hemisphere
31.0
2255
Female, age 91, right hemisphere
28.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
11.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 11.5
Samples: 152
Max nTPM: 19.9
Min nTPM: 3.0
Std nTPM: 3.2
Median nTPM: 11.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
19.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
19.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
18.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
17.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
17.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
17.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
17.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
16.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
16.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
16.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
16.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
16.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
16.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
16.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
16.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
16.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
15.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
15.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
15.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
15.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
15.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
14.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
14.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
14.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
14.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
14.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
14.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
14.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
14.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
13.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
13.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
13.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
13.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
13.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
13.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
13.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
13.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
13.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
13.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
13.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
13.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
13.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
13.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
13.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
13.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
13.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
13.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
13.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
13.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
13.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
12.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
12.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
12.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
12.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
12.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
12.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
12.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
12.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
12.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
12.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
12.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
12.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
12.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
12.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
12.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
12.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
12.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
12.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
11.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
11.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
11.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
11.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
11.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
11.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
11.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
11.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
11.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
11.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
11.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
11.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
11.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
11.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
10.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
10.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
10.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
10.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
10.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
10.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
10.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
10.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
10.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
10.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
10.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
10.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
10.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
10.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
10.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
10.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
10.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
10.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
10.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
10.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
10.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
9.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
9.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
9.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
9.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
9.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
9.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
9.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
9.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
9.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
9.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
9.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
9.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
9.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
9.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
8.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
8.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
8.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
8.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
8.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
8.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
8.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
8.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
8.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
8.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
8.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
7.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
7.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
7.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
7.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
7.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
7.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
7.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
7.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
7.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
6.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
6.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
6.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
5.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
5.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
5.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
4.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
3.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
3.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
19.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 19.1
Samples: 4
Max nTPM: 21.0
Min nTPM: 17.2
Sample A
Male
17.4
Sample B
Male
21.0
Sample C
Female
17.2
Sample D
Female
20.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
