HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:121.2 nTPM
HPA Brain:428.0 nTPM
GTEx:121.2 nTPM
FANTOM5:406.8 Scaled Tags Per Million
Pig:286.9 nTPM
Mouse:91.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039835Antibody CAB000142Antibody CAB018071
Glial cells LowMediumLow
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 428.0
Sample id Sample description nTPM
Hippocampus
nTPM: 362.1
1898 Male, age 80, left hemisphere 406.5
1855 Male, age 76, left hemisphere 389.8
2529 Female, age 94, left hemisphere 365.9
2621 Female, age 67, right hemisphere 361.7
1911 Female, age 85, right hemisphere 345.8
2148 Female, age 91, left hemisphere 302.9
Dentate gyrus
nTPM: 342.7
2010 Male, age 76, both hemispheres 385.4
2246 Female, age 85, both hemispheres 383.5
2530 Female, age 94, left hemisphere 361.9
2528 Male, age 74, both hemispheres 344.8
2531 Female, age 67, both hemispheres 295.0
1927 Female, age 91, both hemispheres 285.8
Entorhinal gyrus
nTPM: 428.0
2764 Male, age 80, right hemisphere 471.8
2117 Female, age 91, right hemisphere 467.6
1938 Female, age 85, left hemisphere 456.3
2613 Female, age 94, left hemisphere 443.7
1787 Male, age 76, left hemisphere 420.2
2686 Male, age 75, right hemisphere 308.2
Hippocampus, CA1
nTPM: 351.0
2527 Male, age 74, both hemispheres 379.0
1873 Female, age 85, both hemispheres 363.5
2045 Male, age 76, both hemispheres 359.8
2749 Male, age 80, left hemisphere 349.9
2082 Female, age 91, right hemisphere 303.1
Hippocampus, CA2
nTPM: 357.3
1892 Male, age 76, both hemispheres 396.5
2249 Male, age 74, both hemispheres 374.2
2437 Female, age 94, left hemisphere 371.1
1940 Female, age 85, left hemisphere 341.8
2113 Female, age 91, right hemisphere 333.9
1963 Male, age 80, left hemisphere 326.5
Hippocampus, CA3
nTPM: 321.3
1891 Female, age 85, both hemispheres 417.8
1867 Male, age 76, both hemispheres 356.9
2620 Female, age 94, left hemisphere 315.8
2137 Male, age 80, left hemisphere 288.2
2436 Male, age 74, both hemispheres 287.3
2861 Female, age 67, both hemispheres 261.9
Parahippocampal cortex
nTPM: 401.0
2532 Female, age 72, left hemisphere 444.0
1933 Female, age 85, both hemispheres 433.5
1850 Male, age 80, both hemispheres 428.1
2692 Male, age 74, both hemispheres 419.7
1990 Female, age 91, right hemisphere 404.4
2245 Female, age 91, both hemispheres 396.0
2250 Female, age 67, right hemisphere 391.5
2018 Male, age 76, both hemispheres 376.4
2693 Female, age 94, both hemispheres 365.0
2622 Female, age 67, right hemisphere 351.8
Perirhinal gyrus
nTPM: 404.7
1847 Female, age 91, left hemisphere 425.9
1794 Male, age 80, right hemisphere 410.4
2848 Male, age 76, right hemisphere 409.0
2521 Female, age 94, right hemisphere 392.6
1841 Female, age 85, right hemisphere 385.7
Subiculum
nTPM: 426.1
1977 Female, age 85, both hemispheres 469.2
2438 Female, age 94, left hemisphere 459.5
1901 Male, age 80, both hemispheres 438.4
2042 Male, age 76, both hemispheres 436.3
2619 Male, age 74, both hemispheres 431.2
2729 Female, age 91, right hemisphere 322.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.2
Samples: 197

Max nTPM: 274.8
Min nTPM: 37.4
Std nTPM: 34.5
Median nTPM: 115.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 274.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 225.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 221.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 219.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 203.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 201.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 200.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 199.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 199.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 192.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 186.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 406.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 406.8
FF:10153-102I9 76 years, female 437.6
FF:10169-103B7 60 years, female 375.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 286.9
Pig sample Sample description nTPM
Subiculum
nTPM: 286.9
Samples: 4

Max nTPM: 344.0
Min nTPM: 240.3
Sample A Female 344.0
Sample B Female 265.1
Sample C Male 298.1
Sample D Male 240.3
Dorsal hippocampus
nTPM: 251.2
Samples: 4

Max nTPM: 306.6
Min nTPM: 167.9
Sample A Female 274.1
Sample B Female 256.0
Sample C Male 306.6
Sample D Male 167.9
Entorhinal cortex
nTPM: 274.9
Samples: 4

Max nTPM: 291.1
Min nTPM: 235.1
Sample A Female 291.1
Sample B Female 235.1
Sample C Male 290.6
Sample D Male 282.8
Ventral hippocampus
nTPM: 272.5
Samples: 4

Max nTPM: 365.6
Min nTPM: 212.7
Sample A Female 253.3
Sample B Female 212.7
Sample C Male 365.6
Sample D Male 258.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 104.3
Min nTPM: 74.4
Sample A Male 90.2
Sample B Male 74.4
Sample C Female 85.5
Sample D Female 104.3
Hippocampal formation
nTPM: 91.7
Samples: 4

Max nTPM: 103.8
Min nTPM: 76.6
Sample A Male 76.6
Sample B Male 93.3
Sample C Female 103.8
Sample D Female 93.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
80342134 Antisense, RP_071204_04_E02, Mouse strain C57BL/6J (56 days, male) 1.6

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