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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
459.8
nTPM
FANTOM5:
684.2
Scaled Tags Per Million
Pig:
281.6
nTPM
Allen mouse:
1.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
459.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 392.6
2188
Female, age 91, both hemispheres
478.3
2301
Female, age 85, both hemispheres
426.9
2090
Male, age 80, both hemispheres
378.5
1984
Male, age 76, both hemispheres
286.8
Dorsal cochlear nucleus nTPM: 347.0
2187
Female, age 91, both hemispheres
437.2
2058
Male, age 76, both hemispheres
326.6
2378
Male, age 80, both hemispheres
325.9
2370
Male, age 61, both hemispheres
324.6
2802
Male, age 74, right hemisphere
321.0
Dorsal tegmental nucleus nTPM: 355.8
2083
Male, age 80, both hemispheres
445.0
2326
Male, age 74, both hemispheres
361.3
1936
Male, age 76, left hemisphere
315.6
2358
Male, age 61, both hemispheres
301.3
Dorsolateral tegmental area nTPM: 369.8
2751
Female, age 85, both hemispheres
448.4
2654
Male, age 80, both hemispheres
420.7
2141
Male, age 76, both hemispheres
367.6
2360
Male, age 74, both hemispheres
310.1
2337
Male, age 61, both hemispheres
302.3
Kolliker-Fuse nucleus nTPM: 442.1
2793
Female, age 91, left hemisphere
565.4
2163
Male, age 80, both hemispheres
385.4
2315
Male, age 76, right hemisphere
375.5
Lateral lemniscal nuclei nTPM: 436.0
2320
Female, age 91, left hemisphere
476.8
2169
Male, age 76, both hemispheres
450.4
2746
Female, age 85, left hemisphere
442.6
2036
Male, age 80, both hemispheres
427.9
2453
Male, age 74, right hemisphere
382.2
Lateral parabrachial nucleus nTPM: 426.5
2792
Male, age 76, both hemispheres
487.9
2139
Female, age 85, right hemisphere
448.0
2013
Male, age 80, both hemispheres
445.0
2790
Male, age 61, both hemispheres
325.1
Lateral vestibular nucleus nTPM: 363.8
2311
Male, age 80, both hemispheres
373.1
2184
Male, age 76, both hemispheres
354.5
Locus coeruleus nTPM: 422.1
2014
Male, age 55, unknown
485.6
2162
Male, age 80, both hemispheres
425.3
2720
Male, age 74, both hemispheres
421.1
2788
Male, age 74, unknown
410.0
2317
Female, age 72, unknown
405.6
2123
Female, age 91, both hemispheres
405.4
1980
Male, age 76, both hemispheres
401.9
Medial parabrachial nucleus nTPM: 399.1
2170
Female, age 91, both hemispheres
469.8
2854
Male, age 80, both hemispheres
440.2
2463
Female, age 85, right hemisphere
385.6
2786
Male, age 76, both hemispheres
370.6
2156
Male, age 61, both hemispheres
329.1
Medial periolivary nuclei nTPM: 414.2
2791
Male, age 74, right hemisphere
442.2
2081
Male, age 80, both hemispheres
417.8
2171
Female, age 85, both hemispheres
406.1
2458
Female, age 91, both hemispheres
404.4
2063
Male, age 76, both hemispheres
400.7
Motor facial nucleus nTPM: 413.4
2697
Female, age 85, both hemispheres
484.2
2365
Male, age 74, right hemisphere
469.2
2126
Male, age 61, both hemispheres
394.4
2327
Male, age 80, both hemispheres
391.4
2062
Male, age 76, both hemispheres
391.2
2795
Female, age 91, both hemispheres
350.3
Motor trigeminal nucleus nTPM: 382.5
2560
Male, age 74, both hemispheres
404.9
2321
Female, age 91, both hemispheres
399.4
2079
Male, age 80, both hemispheres
394.2
2335
Male, age 61, both hemispheres
360.0
2309
Male, age 76, both hemispheres
354.0
Nuclei of the trapezoid body nTPM: 406.3
2159
Male, age 61, both hemispheres
491.3
2166
Male, age 80, both hemispheres
416.4
1983
Male, age 76, both hemispheres
384.8
2368
Female, age 91, both hemispheres
380.7
2735
Female, age 85, both hemispheres
358.1
Nucleus raphe magnus nTPM: 428.2
2459
Female, age 91, both hemispheres
441.4
2160
Male, age 61, both hemispheres
437.8
2328
Male, age 80, both hemispheres
437.4
2051
Male, age 76, both hemispheres
430.9
2455
Male, age 74, both hemispheres
416.3
2172
Female, age 85, both hemispheres
405.5
Paramedian reticular nucleus nTPM: 391.8
2050
Female, age 85, both hemispheres
441.4
2313
Male, age 61, both hemispheres
394.6
2057
Male, age 80, both hemispheres
391.7
2052
Male, age 76, both hemispheres
339.4
Pedunculopontine tegmental nucleus nTPM: 397.1
2334
Male, age 80, both hemispheres
440.2
1921
Female, age 85, both hemispheres
406.5
2338
Male, age 61, both hemispheres
344.7
Pontine nuclei nTPM: 454.8
2454
Male, age 74, left hemisphere
529.4
2787
Female, age 85, both hemispheres
492.0
1863
Male, age 55, unknown
469.8
2319
Female, age 91, both hemispheres
468.9
2109
Female, age 72, unknown
431.0
2727
Male, age 61, right hemisphere
421.5
1968
Male, age 76, left hemisphere
417.2
2115
Male, age 80, left hemisphere
408.3
Pontine raphe nucleus nTPM: 403.7
2853
Male, age 76, midline
409.9
2122
Female, age 85, midline
397.5
Posteroventral cochlear nucleus nTPM: 389.0
2135
Female, age 91, both hemispheres
483.4
2070
Male, age 76, both hemispheres
409.4
2341
Male, age 80, both hemispheres
382.7
2752
Female, age 85, both hemispheres
352.1
2371
Male, age 61, both hemispheres
317.1
Principal sensory trigeminal nucleus nTPM: 400.3
2367
Female, age 91, left hemisphere
478.8
2158
Male, age 61, both hemispheres
410.5
2008
Male, age 80, left hemisphere
371.9
2324
Male, age 76, both hemispheres
339.9
Reticular pontine nucleus, caudal nTPM: 426.9
2092
Male, age 76, both hemispheres
435.7
2457
Female, age 91, both hemispheres
435.4
2559
Male, age 74, both hemispheres
421.9
2332
Male, age 80, right hemisphere
414.5
Reticular pontine nucleus, oral nTPM: 459.8
2366
Female, age 91, both hemispheres
512.0
2361
Male, age 74, both hemispheres
468.0
2012
Female, age 85, both hemispheres
457.3
1939
Male, age 80, both hemispheres
441.1
2167
Male, age 76, both hemispheres
420.6
Reticulotegmental nucleus nTPM: 384.3
2322
Female, age 91, both hemispheres
406.6
2333
Male, age 80, both hemispheres
400.9
2325
Male, age 76, both hemispheres
370.4
2452
Male, age 74, both hemispheres
359.4
Spinal trigeminal nucleus, oral nTPM: 348.8
1978
Male, age 76, both hemispheres
370.6
2164
Male, age 80, both hemispheres
349.6
2737
Female, age 85, both hemispheres
326.1
Subcoeruleus area nTPM: 398.2
2369
Female, age 85, left hemisphere
485.5
1958
Male, age 80, both hemispheres
409.5
2323
Female, age 91, left hemisphere
388.5
2089
Male, age 76, left hemisphere
387.4
2451
Male, age 74, both hemispheres
320.2
Superior olive nTPM: 439.9
2364
Male, age 74, right hemisphere
458.8
2020
Male, age 76, both hemispheres
445.1
1875
Female, age 85, both hemispheres
443.7
2329
Male, age 80, right hemisphere
438.9
2561
Female, age 91, both hemispheres
413.0
Ventral periolivary nuclei nTPM: 409.0
2023
Male, age 76, both hemispheres
458.2
2165
Male, age 80, both hemispheres
418.2
2130
Female, age 85, both hemispheres
413.2
2794
Female, age 91, left hemisphere
346.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 419.5
2840
Female, age 85, both hemispheres
480.7
1959
Male, age 76, both hemispheres
419.4
2449
Male, age 74, both hemispheres
413.4
2161
Male, age 80, both hemispheres
409.3
2359
Male, age 61, both hemispheres
399.1
2456
Female, age 91, both hemispheres
395.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
281.6
Pig sample
Sample description
nTPM
Pons nTPM: 281.6
Samples: 4
Max nTPM: 328.4
Min nTPM: 260.9
Sample A
Female
328.4
Sample B
Female
260.9
Sample C
Male
267.1
Sample D
Male
269.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
