HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:208.9 nTPM
HPA Brain:184.4 nTPM
GTEx:208.9 nTPM
FANTOM5:373.1 Scaled Tags Per Million
Pig:119.5 nTPM
Mouse:105.9 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056820Antibody HPA063147
Glial cells HighMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.4
Sample id Sample description nTPM
Hippocampus
nTPM: 177.2
1911 Female, age 85, right hemisphere 204.2
1855 Male, age 76, left hemisphere 182.7
2621 Female, age 67, right hemisphere 178.3
2529 Female, age 94, left hemisphere 166.7
2148 Female, age 91, left hemisphere 166.5
1898 Male, age 80, left hemisphere 164.6
Dentate gyrus
nTPM: 167.5
2246 Female, age 85, both hemispheres 177.4
2010 Male, age 76, both hemispheres 175.1
2531 Female, age 67, both hemispheres 171.8
2530 Female, age 94, left hemisphere 168.4
1927 Female, age 91, both hemispheres 160.6
2528 Male, age 74, both hemispheres 151.9
Entorhinal gyrus
nTPM: 175.0
2686 Male, age 75, right hemisphere 196.6
2117 Female, age 91, right hemisphere 178.4
1938 Female, age 85, left hemisphere 175.9
1787 Male, age 76, left hemisphere 174.0
2613 Female, age 94, left hemisphere 170.6
2764 Male, age 80, right hemisphere 154.5
Hippocampus, CA1
nTPM: 168.4
1873 Female, age 85, both hemispheres 177.5
2082 Female, age 91, right hemisphere 171.4
2527 Male, age 74, both hemispheres 167.1
2749 Male, age 80, left hemisphere 167.0
2045 Male, age 76, both hemispheres 159.2
Hippocampus, CA2
nTPM: 167.5
1940 Female, age 85, left hemisphere 188.2
1892 Male, age 76, both hemispheres 183.0
2113 Female, age 91, right hemisphere 176.7
2249 Male, age 74, both hemispheres 164.9
1963 Male, age 80, left hemisphere 149.9
2437 Female, age 94, left hemisphere 142.1
Hippocampus, CA3
nTPM: 168.8
1891 Female, age 85, both hemispheres 210.2
1867 Male, age 76, both hemispheres 191.0
2137 Male, age 80, left hemisphere 181.6
2436 Male, age 74, both hemispheres 164.9
2861 Female, age 67, both hemispheres 148.3
2620 Female, age 94, left hemisphere 116.6
Parahippocampal cortex
nTPM: 184.1
1850 Male, age 80, both hemispheres 204.2
2245 Female, age 91, both hemispheres 188.7
2693 Female, age 94, both hemispheres 188.2
2532 Female, age 72, left hemisphere 186.1
1933 Female, age 85, both hemispheres 183.4
2018 Male, age 76, both hemispheres 183.1
1990 Female, age 91, right hemisphere 178.7
2622 Female, age 67, right hemisphere 177.4
2692 Male, age 74, both hemispheres 177.2
2250 Female, age 67, right hemisphere 173.4
Perirhinal gyrus
nTPM: 181.3
1841 Female, age 85, right hemisphere 206.9
2848 Male, age 76, right hemisphere 185.3
1794 Male, age 80, right hemisphere 177.2
1847 Female, age 91, left hemisphere 171.3
2521 Female, age 94, right hemisphere 165.8
Subiculum
nTPM: 184.4
2042 Male, age 76, both hemispheres 207.5
1901 Male, age 80, both hemispheres 203.0
1977 Female, age 85, both hemispheres 188.1
2438 Female, age 94, left hemisphere 186.3
2619 Male, age 74, both hemispheres 161.2
2729 Female, age 91, right hemisphere 160.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 208.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 208.9
Samples: 197

Max nTPM: 406.7
Min nTPM: 85.5
Std nTPM: 51.8
Median nTPM: 199.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 406.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 385.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 373.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 333.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 333.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 325.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 324.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 316.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 309.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 307.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 303.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 373.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 373.1
FF:10169-103B7 60 years, female 419.5
FF:10153-102I9 76 years, female 326.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 119.5
Pig sample Sample description nTPM
Subiculum
nTPM: 107.9
Samples: 4

Max nTPM: 123.7
Min nTPM: 100.5
Sample A Female 123.7
Sample B Female 100.9
Sample C Male 106.3
Sample D Male 100.5
Dorsal hippocampus
nTPM: 119.5
Samples: 4

Max nTPM: 136.1
Min nTPM: 105.9
Sample A Female 128.1
Sample B Female 105.9
Sample C Male 136.1
Sample D Male 108.0
Entorhinal cortex
nTPM: 102.1
Samples: 4

Max nTPM: 106.3
Min nTPM: 99.3
Sample A Female 99.3
Sample B Female 106.3
Sample C Male 99.7
Sample D Male 103.2
Ventral hippocampus
nTPM: 103.7
Samples: 4

Max nTPM: 115.9
Min nTPM: 95.6
Sample A Female 104.5
Sample B Female 95.6
Sample C Male 98.9
Sample D Male 115.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.0
Samples: 4

Max nTPM: 110.9
Min nTPM: 74.6
Sample A Male 105.5
Sample B Male 110.9
Sample C Female 97.1
Sample D Female 74.6
Hippocampal formation
nTPM: 105.9
Samples: 4

Max nTPM: 123.5
Min nTPM: 87.0
Sample A Male 123.5
Sample B Male 114.5
Sample C Female 87.0
Sample D Female 98.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
68445161 Antisense, RP_050111_02_H06, Mouse strain C57BL/6J (56 days, male) 13.0
572 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 1.9
571 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 1.1

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