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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
204.2
nTPM
GTEx:
204.2
nTPM
FANTOM5:
192.9
Scaled Tags Per Million
Pig:
95.2
nTPM
Mouse:
111.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
204.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 204.2
Samples: 105
Max nTPM: 360.1
Min nTPM: 88.6
Std nTPM: 49.2
Median nTPM:
413_1
59 years, female
360.1
501_1
88 years, male
305.2
495_1
57 years, female
303.3
415_1
77 years, female
300.5
137_1
83 years, male
291.0
308_1
70 years, female
290.1
414_1
84 years, female
289.6
490_1
67 years, female
289.5
466_1
57 years, female
284.3
313_1
79 years, female
281.3
149_1
88 years, male
280.8
142_1
61 years, female
278.4
126_1
63 years, male
265.2
217_1
76 years, male
255.7
81_1
67 years, male
254.0
162_1
79 years, female
249.1
17_1
71 years, male
248.0
32_1
67 years, male
245.9
265_1
87 years, male
245.3
139_1
64 years, female
245.0
229_1
69 years, female
239.5
43_1
64 years, female
237.0
499_1
55 years, female
236.0
145_1
84 years, male
235.6
2_1
77 years, female
233.6
288_1
66 years, female
231.4
518_1
75 years, female
231.4
376_1
75 years, female
230.2
468_1
89 years, male
228.1
396_1
62 years, male
225.5
324_1
76 years, male
224.4
189_1
76 years, male
221.5
4_1
88 years, female
219.3
316_1
62 years, male
218.9
491_1
89 years, female
217.7
266_1
85 years, male
216.1
321_1
62 years, female
216.1
264_1
73 years, female
215.8
335_1
73 years, female
213.5
6_1
73 years, female
213.3
89_1
63 years, male
213.2
404_1
82 years, female
210.8
315_1
62 years, female
210.4
115_1
83 years, male
210.3
377_1
82 years, female
209.6
406_1
79 years, male
209.6
153_1
70 years, female
209.2
526_1
61 years, male
209.2
246_1
77 years, male
208.7
117_1
61 years, male
207.8
314_1
67 years, male
207.6
307_1
66 years, female
206.9
480_1
63 years, male
206.3
18_1
88 years, male
205.7
311_1
78 years, male
204.4
425_1
59 years, female
202.8
254_1
77 years, female
202.7
293_1
68 years, female
201.8
322_1
76 years, male
201.7
389_1
86 years, female
200.3
9_1
66 years, female
199.4
109_1
81 years, female
198.4
405_1
91 years, male
197.4
348_1
84 years, male
196.3
286_1
68 years, female
194.6
503_1
68 years, male
193.4
517_1
88 years, male
192.0
292_1
71 years, male
191.2
394_1
75 years, female
191.0
251_1
78 years, male
186.6
319_1
81 years, male
184.6
375_1
74 years, female
182.6
35_1
74 years, female
178.3
379_1
60 years, male
173.6
452_1
88 years, female
170.5
42_1
85 years, male
170.3
386_1
76 years, male
170.0
237_1
82 years, male
168.3
384_1
83 years, male
167.2
120_1
70 years, female
167.1
320_1
89 years, female
167.0
506_1
65 years, male
164.7
172_1
72 years, female
164.2
163_1
78 years, male
162.3
177_1
74 years, male
162.2
291_1
76 years, male
159.4
350_1
84 years, female
156.6
352_1
62 years, male
156.4
349_1
83 years, male
156.2
354_1
81 years, female
155.8
119_1
70 years, female
155.2
353_1
82 years, female
152.5
173_1
67 years, male
152.3
318_1
68 years, male
152.3
295_1
61 years, female
143.5
447_1
81 years, male
143.2
351_1
91 years, male
142.6
243_1
75 years, male
139.5
356_1
87 years, female
137.5
317_1
60 years, male
133.4
41_1
94 years, female
114.7
347_1
72 years, male
110.7
218_1
71 years, female
98.7
355_1
70 years, female
91.9
99_1
64 years, male
88.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.