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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
194.6
nTPM
FANTOM5:
160.3
Scaled Tags Per Million
Pig:
55.5
nTPM
Allen mouse:
1.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
194.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 175.3
2188
Female, age 91, both hemispheres
201.6
2301
Female, age 85, both hemispheres
193.6
2090
Male, age 80, both hemispheres
185.7
1984
Male, age 76, both hemispheres
120.5
Dorsal cochlear nucleus nTPM: 192.4
2802
Male, age 74, right hemisphere
240.9
2378
Male, age 80, both hemispheres
207.4
2187
Female, age 91, both hemispheres
182.5
2370
Male, age 61, both hemispheres
173.6
2058
Male, age 76, both hemispheres
157.7
Dorsal tegmental nucleus nTPM: 163.8
2083
Male, age 80, both hemispheres
187.4
2326
Male, age 74, both hemispheres
183.5
1936
Male, age 76, left hemisphere
159.1
2358
Male, age 61, both hemispheres
125.2
Dorsolateral tegmental area nTPM: 146.5
2654
Male, age 80, both hemispheres
202.0
2751
Female, age 85, both hemispheres
173.2
2337
Male, age 61, both hemispheres
135.0
2360
Male, age 74, both hemispheres
117.8
2141
Male, age 76, both hemispheres
104.7
Kolliker-Fuse nucleus nTPM: 175.5
2793
Female, age 91, left hemisphere
202.4
2315
Male, age 76, right hemisphere
162.5
2163
Male, age 80, both hemispheres
161.5
Lateral lemniscal nuclei nTPM: 140.3
2320
Female, age 91, left hemisphere
158.4
2036
Male, age 80, both hemispheres
143.5
2169
Male, age 76, both hemispheres
141.7
2453
Male, age 74, right hemisphere
131.3
2746
Female, age 85, left hemisphere
126.4
Lateral parabrachial nucleus nTPM: 170.0
2792
Male, age 76, both hemispheres
222.2
2013
Male, age 80, both hemispheres
172.4
2790
Male, age 61, both hemispheres
161.0
2139
Female, age 85, right hemisphere
124.4
Lateral vestibular nucleus nTPM: 167.7
2311
Male, age 80, both hemispheres
183.5
2184
Male, age 76, both hemispheres
151.9
Locus coeruleus nTPM: 109.9
2720
Male, age 74, both hemispheres
152.2
2162
Male, age 80, both hemispheres
121.1
2317
Female, age 72, unknown
113.0
2788
Male, age 74, unknown
101.5
2014
Male, age 55, unknown
96.8
2123
Female, age 91, both hemispheres
96.8
1980
Male, age 76, both hemispheres
88.3
Medial parabrachial nucleus nTPM: 164.0
2170
Female, age 91, both hemispheres
192.8
2854
Male, age 80, both hemispheres
159.0
2786
Male, age 76, both hemispheres
158.8
2463
Female, age 85, right hemisphere
155.8
2156
Male, age 61, both hemispheres
153.5
Medial periolivary nuclei nTPM: 140.4
2081
Male, age 80, both hemispheres
176.5
2458
Female, age 91, both hemispheres
163.4
2063
Male, age 76, both hemispheres
140.8
2791
Male, age 74, right hemisphere
114.6
2171
Female, age 85, both hemispheres
106.4
Motor facial nucleus nTPM: 150.5
2697
Female, age 85, both hemispheres
175.2
2795
Female, age 91, both hemispheres
172.0
2126
Male, age 61, both hemispheres
165.0
2327
Male, age 80, both hemispheres
141.5
2062
Male, age 76, both hemispheres
132.3
2365
Male, age 74, right hemisphere
117.3
Motor trigeminal nucleus nTPM: 160.0
2321
Female, age 91, both hemispheres
189.0
2309
Male, age 76, both hemispheres
177.0
2560
Male, age 74, both hemispheres
151.9
2335
Male, age 61, both hemispheres
144.2
2079
Male, age 80, both hemispheres
137.7
Nuclei of the trapezoid body nTPM: 139.6
2166
Male, age 80, both hemispheres
174.0
2368
Female, age 91, both hemispheres
158.4
1983
Male, age 76, both hemispheres
142.4
2159
Male, age 61, both hemispheres
128.3
2735
Female, age 85, both hemispheres
94.9
Nucleus raphe magnus nTPM: 133.2
2051
Male, age 76, both hemispheres
173.8
2459
Female, age 91, both hemispheres
172.6
2328
Male, age 80, both hemispheres
152.3
2455
Male, age 74, both hemispheres
109.1
2160
Male, age 61, both hemispheres
101.3
2172
Female, age 85, both hemispheres
90.0
Paramedian reticular nucleus nTPM: 158.0
2052
Male, age 76, both hemispheres
197.8
2057
Male, age 80, both hemispheres
156.0
2313
Male, age 61, both hemispheres
142.8
2050
Female, age 85, both hemispheres
135.6
Pedunculopontine tegmental nucleus nTPM: 141.1
2334
Male, age 80, both hemispheres
161.8
2338
Male, age 61, both hemispheres
138.3
1921
Female, age 85, both hemispheres
123.2
Pontine nuclei nTPM: 147.2
2319
Female, age 91, both hemispheres
194.2
2115
Male, age 80, left hemisphere
169.4
1968
Male, age 76, left hemisphere
165.6
2109
Female, age 72, unknown
149.9
2454
Male, age 74, left hemisphere
149.7
1863
Male, age 55, unknown
143.0
2727
Male, age 61, right hemisphere
103.1
2787
Female, age 85, both hemispheres
103.1
Pontine raphe nucleus nTPM: 120.5
2853
Male, age 76, midline
123.5
2122
Female, age 85, midline
117.4
Posteroventral cochlear nucleus nTPM: 194.6
2341
Male, age 80, both hemispheres
247.6
2135
Female, age 91, both hemispheres
220.3
2371
Male, age 61, both hemispheres
220.1
2070
Male, age 76, both hemispheres
153.9
2752
Female, age 85, both hemispheres
130.9
Principal sensory trigeminal nucleus nTPM: 141.4
2367
Female, age 91, left hemisphere
177.9
2324
Male, age 76, both hemispheres
153.6
2008
Male, age 80, left hemisphere
117.3
2158
Male, age 61, both hemispheres
116.8
Reticular pontine nucleus, caudal nTPM: 164.0
2559
Male, age 74, both hemispheres
183.3
2457
Female, age 91, both hemispheres
178.0
2092
Male, age 76, both hemispheres
161.2
2332
Male, age 80, right hemisphere
133.7
Reticular pontine nucleus, oral nTPM: 154.7
2366
Female, age 91, both hemispheres
186.7
1939
Male, age 80, both hemispheres
164.3
2167
Male, age 76, both hemispheres
155.8
2012
Female, age 85, both hemispheres
138.4
2361
Male, age 74, both hemispheres
128.5
Reticulotegmental nucleus nTPM: 171.2
2322
Female, age 91, both hemispheres
190.7
2452
Male, age 74, both hemispheres
183.6
2333
Male, age 80, both hemispheres
174.3
2325
Male, age 76, both hemispheres
136.2
Spinal trigeminal nucleus, oral nTPM: 139.2
2164
Male, age 80, both hemispheres
170.5
1978
Male, age 76, both hemispheres
132.1
2737
Female, age 85, both hemispheres
114.8
Subcoeruleus area nTPM: 156.0
2369
Female, age 85, left hemisphere
194.0
2451
Male, age 74, both hemispheres
179.9
2089
Male, age 76, left hemisphere
143.7
1958
Male, age 80, both hemispheres
143.0
2323
Female, age 91, left hemisphere
119.2
Superior olive nTPM: 150.3
2020
Male, age 76, both hemispheres
183.2
2561
Female, age 91, both hemispheres
172.1
2329
Male, age 80, right hemisphere
162.6
1875
Female, age 85, both hemispheres
127.5
2364
Male, age 74, right hemisphere
105.9
Ventral periolivary nuclei nTPM: 140.7
2023
Male, age 76, both hemispheres
176.1
2794
Female, age 91, left hemisphere
154.4
2165
Male, age 80, both hemispheres
134.4
2130
Female, age 85, both hemispheres
97.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 144.5
2456
Female, age 91, both hemispheres
173.5
2161
Male, age 80, both hemispheres
160.5
2840
Female, age 85, both hemispheres
150.5
1959
Male, age 76, both hemispheres
146.2
2359
Male, age 61, both hemispheres
124.8
2449
Male, age 74, both hemispheres
111.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
55.5
Pig sample
Sample description
nTPM
Pons nTPM: 55.5
Samples: 4
Max nTPM: 65.9
Min nTPM: 43.9
Sample A
Female
54.9
Sample B
Female
43.9
Sample C
Male
57.3
Sample D
Male
65.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
