HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:132.1 nTPM
HPA Brain:458.2 nTPM
GTEx:132.1 nTPM
FANTOM5:504.6 Scaled Tags Per Million
Pig:523.5 nTPM
Mouse:1561.9 nTPM
Allen mouse:24.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003140Antibody CAB062566Antibody CAB068245
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 458.2
Sample id Sample description nTPM
Hippocampus
nTPM: 374.1
2621 Female, age 67, right hemisphere 425.7
1898 Male, age 80, left hemisphere 424.0
2148 Female, age 91, left hemisphere 408.6
1855 Male, age 76, left hemisphere 383.9
1911 Female, age 85, right hemisphere 315.5
2529 Female, age 94, left hemisphere 286.8
Dentate gyrus
nTPM: 350.9
1927 Female, age 91, both hemispheres 568.7
2010 Male, age 76, both hemispheres 392.7
2246 Female, age 85, both hemispheres 351.7
2531 Female, age 67, both hemispheres 282.8
2528 Male, age 74, both hemispheres 260.1
2530 Female, age 94, left hemisphere 249.3
Entorhinal gyrus
nTPM: 312.9
1938 Female, age 85, left hemisphere 388.8
2764 Male, age 80, right hemisphere 348.5
2613 Female, age 94, left hemisphere 306.4
1787 Male, age 76, left hemisphere 302.6
2117 Female, age 91, right hemisphere 283.9
2686 Male, age 75, right hemisphere 246.9
Hippocampus, CA1
nTPM: 441.4
2749 Male, age 80, left hemisphere 638.3
2045 Male, age 76, both hemispheres 466.1
1873 Female, age 85, both hemispheres 406.9
2082 Female, age 91, right hemisphere 355.9
2527 Male, age 74, both hemispheres 340.0
Hippocampus, CA2
nTPM: 341.7
1892 Male, age 76, both hemispheres 477.0
1963 Male, age 80, left hemisphere 401.5
2113 Female, age 91, right hemisphere 316.1
1940 Female, age 85, left hemisphere 309.5
2249 Male, age 74, both hemispheres 290.2
2437 Female, age 94, left hemisphere 256.0
Hippocampus, CA3
nTPM: 357.3
2137 Male, age 80, left hemisphere 458.0
1867 Male, age 76, both hemispheres 409.5
2620 Female, age 94, left hemisphere 365.0
2436 Male, age 74, both hemispheres 326.3
1891 Female, age 85, both hemispheres 292.7
2861 Female, age 67, both hemispheres 292.4
Parahippocampal cortex
nTPM: 389.3
2245 Female, age 91, both hemispheres 445.0
2622 Female, age 67, right hemisphere 443.9
1850 Male, age 80, both hemispheres 443.5
2250 Female, age 67, right hemisphere 422.3
1933 Female, age 85, both hemispheres 385.9
2693 Female, age 94, both hemispheres 382.9
2532 Female, age 72, left hemisphere 377.2
1990 Female, age 91, right hemisphere 368.8
2018 Male, age 76, both hemispheres 341.2
2692 Male, age 74, both hemispheres 282.7
Perirhinal gyrus
nTPM: 458.2
1847 Female, age 91, left hemisphere 530.9
1841 Female, age 85, right hemisphere 508.2
1794 Male, age 80, right hemisphere 486.1
2521 Female, age 94, right hemisphere 399.7
2848 Male, age 76, right hemisphere 366.4
Subiculum
nTPM: 301.7
1977 Female, age 85, both hemispheres 326.7
2619 Male, age 74, both hemispheres 319.3
2438 Female, age 94, left hemisphere 317.6
1901 Male, age 80, both hemispheres 313.8
2729 Female, age 91, right hemisphere 304.8
2042 Male, age 76, both hemispheres 228.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.1
Samples: 197

Max nTPM: 371.3
Min nTPM: 17.7
Std nTPM: 83.1
Median nTPM: 117.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 371.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 370.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 358.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 354.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 346.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 339.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 335.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 323.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 319.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 317.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 317.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 504.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 504.6
FF:10169-103B7 60 years, female 669.8
FF:10153-102I9 76 years, female 339.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 523.5
Pig sample Sample description nTPM
Subiculum
nTPM: 444.3
Samples: 4

Max nTPM: 562.4
Min nTPM: 371.5
Sample A Female 562.4
Sample B Female 433.8
Sample C Male 409.5
Sample D Male 371.5
Dorsal hippocampus
nTPM: 523.5
Samples: 4

Max nTPM: 606.4
Min nTPM: 446.0
Sample A Female 606.4
Sample B Female 543.5
Sample C Male 446.0
Sample D Male 498.1
Entorhinal cortex
nTPM: 462.4
Samples: 4

Max nTPM: 480.7
Min nTPM: 418.1
Sample A Female 480.7
Sample B Female 480.2
Sample C Male 470.5
Sample D Male 418.1
Ventral hippocampus
nTPM: 487.1
Samples: 4

Max nTPM: 591.1
Min nTPM: 403.3
Sample A Female 441.5
Sample B Female 403.3
Sample C Male 591.1
Sample D Male 512.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1561.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1561.9
Samples: 4

Max nTPM: 1657.2
Min nTPM: 1486.6
Sample A Male 1556.8
Sample B Male 1546.9
Sample C Female 1486.6
Sample D Female 1657.2
Hippocampal formation
nTPM: 1302.8
Samples: 4

Max nTPM: 1453.1
Min nTPM: 1243.5
Sample A Male 1453.1
Sample B Male 1243.5
Sample C Female 1249.0
Sample D Female 1265.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.0
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 24.0

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