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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
278.1
nTPM
GTEx:
278.1
nTPM
FANTOM5:
145.3
Scaled Tags Per Million
Pig:
102.2
nTPM
Mouse:
1018.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
278.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 278.1
Samples: 105
Max nTPM: 374.3
Min nTPM: 184.6
Std nTPM: 33.8
Median nTPM:
6_1
73 years, female
374.3
2_1
77 years, female
372.4
322_1
76 years, male
370.3
321_1
62 years, female
366.9
35_1
74 years, female
353.5
386_1
76 years, male
329.1
375_1
74 years, female
326.0
145_1
84 years, male
322.7
142_1
61 years, female
316.2
316_1
62 years, male
315.1
126_1
63 years, male
313.2
218_1
71 years, female
312.7
153_1
70 years, female
312.2
237_1
82 years, male
311.8
81_1
67 years, male
311.1
139_1
64 years, female
309.5
447_1
81 years, male
309.3
379_1
60 years, male
308.2
347_1
72 years, male
307.1
377_1
82 years, female
306.6
415_1
77 years, female
305.8
243_1
75 years, male
305.6
17_1
71 years, male
303.1
162_1
79 years, female
302.9
324_1
76 years, male
301.7
115_1
83 years, male
300.0
229_1
69 years, female
300.0
526_1
61 years, male
299.6
173_1
67 years, male
298.1
117_1
61 years, male
296.4
172_1
72 years, female
296.0
43_1
64 years, female
295.7
376_1
75 years, female
295.1
480_1
63 years, male
293.8
18_1
88 years, male
293.1
352_1
62 years, male
292.3
319_1
81 years, male
290.0
354_1
81 years, female
287.7
9_1
66 years, female
287.1
320_1
89 years, female
286.7
335_1
73 years, female
285.8
468_1
89 years, male
285.5
404_1
82 years, female
285.4
120_1
70 years, female
285.2
518_1
75 years, female
281.8
32_1
67 years, male
280.2
307_1
66 years, female
279.9
491_1
89 years, female
279.4
317_1
60 years, male
276.9
99_1
64 years, male
275.2
506_1
65 years, male
274.4
217_1
76 years, male
272.9
4_1
88 years, female
272.2
350_1
84 years, female
272.2
413_1
59 years, female
272.1
425_1
59 years, female
271.9
389_1
86 years, female
271.7
119_1
70 years, female
271.2
189_1
76 years, male
270.5
414_1
84 years, female
270.4
318_1
68 years, male
268.5
246_1
77 years, male
268.2
405_1
91 years, male
266.7
315_1
62 years, female
265.8
353_1
82 years, female
264.6
490_1
67 years, female
264.5
501_1
88 years, male
263.9
348_1
84 years, male
263.8
288_1
66 years, female
263.5
177_1
74 years, male
262.5
384_1
83 years, male
261.4
265_1
87 years, male
261.0
396_1
62 years, male
259.3
266_1
85 years, male
258.9
292_1
71 years, male
258.4
293_1
68 years, female
258.2
452_1
88 years, female
257.8
137_1
83 years, male
256.5
313_1
79 years, female
255.4
311_1
78 years, male
254.4
406_1
79 years, male
254.2
291_1
76 years, male
252.8
355_1
70 years, female
252.6
349_1
83 years, male
251.6
42_1
85 years, male
250.7
264_1
73 years, female
250.7
466_1
57 years, female
249.4
251_1
78 years, male
248.2
495_1
57 years, female
247.9
499_1
55 years, female
246.1
89_1
63 years, male
245.6
351_1
91 years, male
245.5
109_1
81 years, female
245.4
286_1
68 years, female
245.2
149_1
88 years, male
242.5
295_1
61 years, female
241.3
517_1
88 years, male
238.1
356_1
87 years, female
232.6
41_1
94 years, female
232.0
163_1
78 years, male
227.5
503_1
68 years, male
226.6
394_1
75 years, female
223.3
254_1
77 years, female
220.8
314_1
67 years, male
201.8
308_1
70 years, female
184.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.