HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:489.9 nTPM
HPA Brain:474.5 nTPM
GTEx:489.9 nTPM
FANTOM5:653.7 Scaled Tags Per Million
Pig:246.2 nTPM
Mouse:308.6 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045617
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 474.5
Sample id Sample description nTPM
Hippocampus
nTPM: 474.5
2148 Female, age 91, left hemisphere 519.7
1855 Male, age 76, left hemisphere 489.3
1898 Male, age 80, left hemisphere 477.2
1911 Female, age 85, right hemisphere 474.9
2529 Female, age 94, left hemisphere 470.0
2621 Female, age 67, right hemisphere 415.8
Dentate gyrus
nTPM: 376.2
2528 Male, age 74, both hemispheres 447.5
2530 Female, age 94, left hemisphere 411.4
2010 Male, age 76, both hemispheres 406.4
2246 Female, age 85, both hemispheres 356.1
1927 Female, age 91, both hemispheres 346.2
2531 Female, age 67, both hemispheres 289.8
Entorhinal gyrus
nTPM: 399.8
2117 Female, age 91, right hemisphere 642.2
2686 Male, age 75, right hemisphere 396.8
2764 Male, age 80, right hemisphere 371.4
1938 Female, age 85, left hemisphere 363.7
1787 Male, age 76, left hemisphere 362.5
2613 Female, age 94, left hemisphere 261.9
Hippocampus, CA1
nTPM: 354.5
1873 Female, age 85, both hemispheres 430.5
2527 Male, age 74, both hemispheres 410.2
2082 Female, age 91, right hemisphere 347.6
2045 Male, age 76, both hemispheres 300.0
2749 Male, age 80, left hemisphere 284.3
Hippocampus, CA2
nTPM: 388.5
1963 Male, age 80, left hemisphere 437.0
2249 Male, age 74, both hemispheres 430.6
1940 Female, age 85, left hemisphere 427.3
2113 Female, age 91, right hemisphere 391.2
2437 Female, age 94, left hemisphere 381.0
1892 Male, age 76, both hemispheres 264.1
Hippocampus, CA3
nTPM: 371.0
1891 Female, age 85, both hemispheres 490.1
2861 Female, age 67, both hemispheres 424.4
2620 Female, age 94, left hemisphere 394.9
1867 Male, age 76, both hemispheres 344.8
2436 Male, age 74, both hemispheres 312.5
2137 Male, age 80, left hemisphere 259.1
Parahippocampal cortex
nTPM: 339.8
2692 Male, age 74, both hemispheres 478.5
2018 Male, age 76, both hemispheres 388.2
1933 Female, age 85, both hemispheres 361.8
1990 Female, age 91, right hemisphere 331.5
2245 Female, age 91, both hemispheres 324.3
2532 Female, age 72, left hemisphere 323.6
2622 Female, age 67, right hemisphere 323.1
1850 Male, age 80, both hemispheres 318.6
2693 Female, age 94, both hemispheres 289.6
2250 Female, age 67, right hemisphere 258.7
Perirhinal gyrus
nTPM: 273.2
1794 Male, age 80, right hemisphere 312.5
1841 Female, age 85, right hemisphere 279.7
2521 Female, age 94, right hemisphere 267.1
2848 Male, age 76, right hemisphere 255.2
1847 Female, age 91, left hemisphere 251.4
Subiculum
nTPM: 462.2
2042 Male, age 76, both hemispheres 543.4
2729 Female, age 91, right hemisphere 516.4
2619 Male, age 74, both hemispheres 481.5
1901 Male, age 80, both hemispheres 479.7
1977 Female, age 85, both hemispheres 376.5
2438 Female, age 94, left hemisphere 376.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 489.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 489.9
Samples: 197

Max nTPM: 1173.6
Min nTPM: 181.5
Std nTPM: 175.0
Median nTPM: 470.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1173.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1136.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1119.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 907.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 874.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 856.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 849.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 847.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 840.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 828.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 820.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 653.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 653.7
FF:10153-102I9 76 years, female 882.6
FF:10169-103B7 60 years, female 424.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 246.2
Pig sample Sample description nTPM
Subiculum
nTPM: 124.3
Samples: 4

Max nTPM: 154.1
Min nTPM: 96.1
Sample A Female 154.1
Sample B Female 144.7
Sample C Male 102.1
Sample D Male 96.1
Dorsal hippocampus
nTPM: 246.2
Samples: 4

Max nTPM: 348.1
Min nTPM: 100.1
Sample A Female 325.8
Sample B Female 210.9
Sample C Male 348.1
Sample D Male 100.1
Entorhinal cortex
nTPM: 118.2
Samples: 4

Max nTPM: 160.7
Min nTPM: 100.1
Sample A Female 100.1
Sample B Female 160.7
Sample C Male 105.5
Sample D Male 106.3
Ventral hippocampus
nTPM: 189.3
Samples: 4

Max nTPM: 224.6
Min nTPM: 142.8
Sample A Female 182.4
Sample B Female 142.8
Sample C Male 224.6
Sample D Male 207.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 308.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 265.9
Samples: 4

Max nTPM: 325.7
Min nTPM: 203.2
Sample A Male 325.7
Sample B Male 259.8
Sample C Female 274.7
Sample D Female 203.2
Hippocampal formation
nTPM: 308.6
Samples: 4

Max nTPM: 356.1
Min nTPM: 277.6
Sample A Male 296.6
Sample B Male 277.6
Sample C Female 356.1
Sample D Female 304.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68269598 Antisense, RP_041129_01_H05, Mouse strain C57BL/6J (56 days, male) 4.2
2130 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 3.4
2129 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 2.7

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