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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
635.9
nTPM
FANTOM5:
826.6
Scaled Tags Per Million
Pig:
426.4
nTPM
Allen mouse:
4.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
635.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 426.0
2301
Female, age 85, both hemispheres
486.2
2090
Male, age 80, both hemispheres
459.9
2188
Female, age 91, both hemispheres
390.3
1984
Male, age 76, both hemispheres
367.7
Dorsal cochlear nucleus nTPM: 635.9
2802
Male, age 74, right hemisphere
778.8
2370
Male, age 61, both hemispheres
692.9
2378
Male, age 80, both hemispheres
670.2
2058
Male, age 76, both hemispheres
617.1
2187
Female, age 91, both hemispheres
420.7
Dorsal tegmental nucleus nTPM: 483.1
2083
Male, age 80, both hemispheres
593.3
1936
Male, age 76, left hemisphere
515.0
2326
Male, age 74, both hemispheres
497.6
2358
Male, age 61, both hemispheres
326.5
Dorsolateral tegmental area nTPM: 442.1
2654
Male, age 80, both hemispheres
582.6
2751
Female, age 85, both hemispheres
549.1
2360
Male, age 74, both hemispheres
400.3
2141
Male, age 76, both hemispheres
387.2
2337
Male, age 61, both hemispheres
291.4
Kolliker-Fuse nucleus nTPM: 526.6
2315
Male, age 76, right hemisphere
622.3
2793
Female, age 91, left hemisphere
486.0
2163
Male, age 80, both hemispheres
471.5
Lateral lemniscal nuclei nTPM: 415.7
2169
Male, age 76, both hemispheres
456.5
2036
Male, age 80, both hemispheres
434.9
2453
Male, age 74, right hemisphere
413.3
2320
Female, age 91, left hemisphere
392.4
2746
Female, age 85, left hemisphere
381.3
Lateral parabrachial nucleus nTPM: 525.3
2792
Male, age 76, both hemispheres
667.2
2013
Male, age 80, both hemispheres
554.3
2139
Female, age 85, right hemisphere
522.0
2790
Male, age 61, both hemispheres
357.7
Lateral vestibular nucleus nTPM: 530.4
2184
Male, age 76, both hemispheres
538.9
2311
Male, age 80, both hemispheres
521.9
Locus coeruleus nTPM: 377.0
2317
Female, age 72, unknown
473.1
2162
Male, age 80, both hemispheres
383.8
2788
Male, age 74, unknown
377.3
2123
Female, age 91, both hemispheres
361.2
1980
Male, age 76, both hemispheres
359.9
2014
Male, age 55, unknown
350.6
2720
Male, age 74, both hemispheres
333.4
Medial parabrachial nucleus nTPM: 446.4
2786
Male, age 76, both hemispheres
518.1
2463
Female, age 85, right hemisphere
501.4
2854
Male, age 80, both hemispheres
457.2
2170
Female, age 91, both hemispheres
396.9
2156
Male, age 61, both hemispheres
358.5
Medial periolivary nuclei nTPM: 403.2
2063
Male, age 76, both hemispheres
441.6
2791
Male, age 74, right hemisphere
435.5
2458
Female, age 91, both hemispheres
403.4
2081
Male, age 80, both hemispheres
402.7
2171
Female, age 85, both hemispheres
332.9
Motor facial nucleus nTPM: 467.3
2795
Female, age 91, both hemispheres
683.5
2062
Male, age 76, both hemispheres
462.5
2126
Male, age 61, both hemispheres
445.1
2697
Female, age 85, both hemispheres
441.3
2365
Male, age 74, right hemisphere
419.1
2327
Male, age 80, both hemispheres
352.4
Motor trigeminal nucleus nTPM: 446.7
2309
Male, age 76, both hemispheres
555.5
2560
Male, age 74, both hemispheres
497.2
2335
Male, age 61, both hemispheres
456.8
2321
Female, age 91, both hemispheres
364.4
2079
Male, age 80, both hemispheres
359.4
Nuclei of the trapezoid body nTPM: 424.3
2368
Female, age 91, both hemispheres
528.7
1983
Male, age 76, both hemispheres
467.1
2166
Male, age 80, both hemispheres
423.4
2159
Male, age 61, both hemispheres
390.2
2735
Female, age 85, both hemispheres
312.0
Nucleus raphe magnus nTPM: 391.2
2051
Male, age 76, both hemispheres
494.0
2328
Male, age 80, both hemispheres
473.6
2459
Female, age 91, both hemispheres
445.9
2455
Male, age 74, both hemispheres
371.9
2160
Male, age 61, both hemispheres
328.8
2172
Female, age 85, both hemispheres
233.1
Paramedian reticular nucleus nTPM: 445.0
2057
Male, age 80, both hemispheres
470.5
2050
Female, age 85, both hemispheres
450.4
2052
Male, age 76, both hemispheres
447.5
2313
Male, age 61, both hemispheres
411.6
Pedunculopontine tegmental nucleus nTPM: 439.4
1921
Female, age 85, both hemispheres
505.4
2334
Male, age 80, both hemispheres
489.5
2338
Male, age 61, both hemispheres
323.3
Pontine nuclei nTPM: 410.8
1863
Male, age 55, unknown
554.5
1968
Male, age 76, left hemisphere
450.0
2109
Female, age 72, unknown
444.0
2115
Male, age 80, left hemisphere
405.0
2454
Male, age 74, left hemisphere
389.0
2319
Female, age 91, both hemispheres
380.0
2787
Female, age 85, both hemispheres
352.2
2727
Male, age 61, right hemisphere
311.5
Pontine raphe nucleus nTPM: 461.1
2853
Male, age 76, midline
540.0
2122
Female, age 85, midline
382.1
Posteroventral cochlear nucleus nTPM: 514.0
2371
Male, age 61, both hemispheres
728.8
2070
Male, age 76, both hemispheres
523.8
2752
Female, age 85, both hemispheres
492.1
2341
Male, age 80, both hemispheres
455.1
2135
Female, age 91, both hemispheres
370.1
Principal sensory trigeminal nucleus nTPM: 406.5
2324
Male, age 76, both hemispheres
586.6
2367
Female, age 91, left hemisphere
360.7
2008
Male, age 80, left hemisphere
350.0
2158
Male, age 61, both hemispheres
328.6
Reticular pontine nucleus, caudal nTPM: 465.1
2457
Female, age 91, both hemispheres
534.7
2092
Male, age 76, both hemispheres
529.7
2559
Male, age 74, both hemispheres
417.3
2332
Male, age 80, right hemisphere
378.7
Reticular pontine nucleus, oral nTPM: 487.1
2167
Male, age 76, both hemispheres
585.4
1939
Male, age 80, both hemispheres
580.2
2012
Female, age 85, both hemispheres
476.4
2366
Female, age 91, both hemispheres
447.2
2361
Male, age 74, both hemispheres
346.5
Reticulotegmental nucleus nTPM: 488.6
2333
Male, age 80, both hemispheres
547.6
2452
Male, age 74, both hemispheres
514.7
2322
Female, age 91, both hemispheres
500.9
2325
Male, age 76, both hemispheres
391.2
Spinal trigeminal nucleus, oral nTPM: 473.7
1978
Male, age 76, both hemispheres
529.8
2164
Male, age 80, both hemispheres
477.0
2737
Female, age 85, both hemispheres
414.3
Subcoeruleus area nTPM: 463.8
2369
Female, age 85, left hemisphere
616.4
2451
Male, age 74, both hemispheres
479.1
1958
Male, age 80, both hemispheres
433.7
2323
Female, age 91, left hemisphere
406.0
2089
Male, age 76, left hemisphere
383.8
Superior olive nTPM: 428.1
2020
Male, age 76, both hemispheres
487.5
2329
Male, age 80, right hemisphere
437.6
2561
Female, age 91, both hemispheres
420.0
1875
Female, age 85, both hemispheres
398.9
2364
Male, age 74, right hemisphere
396.4
Ventral periolivary nuclei nTPM: 391.3
2023
Male, age 76, both hemispheres
488.6
2165
Male, age 80, both hemispheres
430.8
2130
Female, age 85, both hemispheres
350.5
2794
Female, age 91, left hemisphere
295.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 466.7
2456
Female, age 91, both hemispheres
528.0
2359
Male, age 61, both hemispheres
474.3
2161
Male, age 80, both hemispheres
473.4
2840
Female, age 85, both hemispheres
472.6
1959
Male, age 76, both hemispheres
469.6
2449
Male, age 74, both hemispheres
382.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
426.4
Pig sample
Sample description
nTPM
Pons nTPM: 426.5
Samples: 4
Max nTPM: 529.0
Min nTPM: 354.3
Sample A
Female
354.3
Sample B
Female
355.7
Sample C
Male
466.8
Sample D
Male
529.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
