HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:55.7 nTPM
HPA Brain:83.6 nTPM
GTEx:55.7 nTPM
FANTOM5:199.3 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:56.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018976Antibody HPA029591
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.6
Sample id Sample description nTPM
Hippocampus
nTPM: 69.1
2529 Female, age 94, left hemisphere 83.0
1898 Male, age 80, left hemisphere 78.6
2148 Female, age 91, left hemisphere 69.6
2621 Female, age 67, right hemisphere 62.9
1855 Male, age 76, left hemisphere 61.8
1911 Female, age 85, right hemisphere 58.8
Dentate gyrus
nTPM: 68.2
2530 Female, age 94, left hemisphere 78.0
2528 Male, age 74, both hemispheres 77.1
2246 Female, age 85, both hemispheres 70.8
2010 Male, age 76, both hemispheres 62.0
1927 Female, age 91, both hemispheres 61.0
2531 Female, age 67, both hemispheres 60.2
Entorhinal gyrus
nTPM: 83.6
2764 Male, age 80, right hemisphere 97.1
2686 Male, age 75, right hemisphere 83.7
1938 Female, age 85, left hemisphere 83.6
2613 Female, age 94, left hemisphere 81.1
1787 Male, age 76, left hemisphere 78.9
2117 Female, age 91, right hemisphere 77.5
Hippocampus, CA1
nTPM: 64.6
2082 Female, age 91, right hemisphere 75.9
1873 Female, age 85, both hemispheres 67.2
2527 Male, age 74, both hemispheres 64.0
2749 Male, age 80, left hemisphere 62.7
2045 Male, age 76, both hemispheres 53.0
Hippocampus, CA2
nTPM: 71.7
1963 Male, age 80, left hemisphere 78.3
1892 Male, age 76, both hemispheres 74.7
2437 Female, age 94, left hemisphere 72.4
2113 Female, age 91, right hemisphere 72.2
2249 Male, age 74, both hemispheres 68.0
1940 Female, age 85, left hemisphere 64.8
Hippocampus, CA3
nTPM: 65.4
1891 Female, age 85, both hemispheres 73.8
1867 Male, age 76, both hemispheres 72.6
2436 Male, age 74, both hemispheres 67.9
2861 Female, age 67, both hemispheres 65.7
2137 Male, age 80, left hemisphere 58.4
2620 Female, age 94, left hemisphere 53.9
Parahippocampal cortex
nTPM: 73.5
1850 Male, age 80, both hemispheres 93.0
1990 Female, age 91, right hemisphere 79.7
2692 Male, age 74, both hemispheres 79.6
2532 Female, age 72, left hemisphere 76.5
1933 Female, age 85, both hemispheres 75.3
2245 Female, age 91, both hemispheres 74.0
2018 Male, age 76, both hemispheres 67.3
2250 Female, age 67, right hemisphere 65.5
2693 Female, age 94, both hemispheres 62.7
2622 Female, age 67, right hemisphere 61.4
Perirhinal gyrus
nTPM: 78.3
1847 Female, age 91, left hemisphere 90.4
2848 Male, age 76, right hemisphere 84.7
1794 Male, age 80, right hemisphere 80.9
1841 Female, age 85, right hemisphere 72.8
2521 Female, age 94, right hemisphere 62.7
Subiculum
nTPM: 75.6
1977 Female, age 85, both hemispheres 90.8
1901 Male, age 80, both hemispheres 79.3
2619 Male, age 74, both hemispheres 74.1
2438 Female, age 94, left hemisphere 72.2
2729 Female, age 91, right hemisphere 71.6
2042 Male, age 76, both hemispheres 65.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.7
Samples: 197

Max nTPM: 93.3
Min nTPM: 27.1
Std nTPM: 11.4
Median nTPM: 54.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 92.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 90.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 87.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 87.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 85.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 79.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 78.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 77.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 75.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 75.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.3
FF:10169-103B7 60 years, female 202.5
FF:10153-102I9 76 years, female 196.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 28.7
Min nTPM: 20.5
Sample A Female 28.7
Sample B Female 23.2
Sample C Male 22.0
Sample D Male 20.5
Dorsal hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 23.2
Min nTPM: 12.6
Sample A Female 23.2
Sample B Female 19.6
Sample C Male 19.7
Sample D Male 12.6
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 19.7
Sample A Female 22.1
Sample B Female 20.2
Sample C Male 25.9
Sample D Male 19.7
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.3
Sample A Female 19.3
Sample B Female 16.3
Sample C Male 28.2
Sample D Male 19.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.5
Samples: 4

Max nTPM: 57.7
Min nTPM: 40.8
Sample A Male 40.8
Sample B Male 48.6
Sample C Female 55.0
Sample D Female 57.7
Hippocampal formation
nTPM: 56.8
Samples: 4

Max nTPM: 57.6
Min nTPM: 54.9
Sample A Male 57.4
Sample B Male 57.3
Sample C Female 54.9
Sample D Female 57.6

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