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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
134.3
nTPM
FANTOM5:
247.4
Scaled Tags Per Million
Pig:
33.7
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
134.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 103.4
2090
Male, age 80, both hemispheres
121.2
2188
Female, age 91, both hemispheres
113.4
2301
Female, age 85, both hemispheres
105.7
1984
Male, age 76, both hemispheres
73.1
Dorsal cochlear nucleus nTPM: 108.2
2187
Female, age 91, both hemispheres
115.0
2802
Male, age 74, right hemisphere
112.6
2378
Male, age 80, both hemispheres
108.9
2058
Male, age 76, both hemispheres
105.8
2370
Male, age 61, both hemispheres
98.5
Dorsal tegmental nucleus nTPM: 105.2
2083
Male, age 80, both hemispheres
120.5
2326
Male, age 74, both hemispheres
102.3
1936
Male, age 76, left hemisphere
100.2
2358
Male, age 61, both hemispheres
97.9
Dorsolateral tegmental area nTPM: 114.5
2141
Male, age 76, both hemispheres
123.4
2654
Male, age 80, both hemispheres
120.5
2337
Male, age 61, both hemispheres
119.0
2751
Female, age 85, both hemispheres
115.0
2360
Male, age 74, both hemispheres
94.6
Kolliker-Fuse nucleus nTPM: 103.5
2163
Male, age 80, both hemispheres
112.5
2793
Female, age 91, left hemisphere
106.5
2315
Male, age 76, right hemisphere
91.3
Lateral lemniscal nuclei nTPM: 102.7
2169
Male, age 76, both hemispheres
121.7
2746
Female, age 85, left hemisphere
112.0
2453
Male, age 74, right hemisphere
98.3
2320
Female, age 91, left hemisphere
93.3
2036
Male, age 80, both hemispheres
88.1
Lateral parabrachial nucleus nTPM: 108.5
2790
Male, age 61, both hemispheres
116.4
2139
Female, age 85, right hemisphere
109.6
2013
Male, age 80, both hemispheres
105.9
2792
Male, age 76, both hemispheres
102.0
Lateral vestibular nucleus nTPM: 120.2
2311
Male, age 80, both hemispheres
122.3
2184
Male, age 76, both hemispheres
118.2
Locus coeruleus nTPM: 130.7
2014
Male, age 55, unknown
156.1
1980
Male, age 76, both hemispheres
155.6
2123
Female, age 91, both hemispheres
131.0
2317
Female, age 72, unknown
129.3
2788
Male, age 74, unknown
122.8
2162
Male, age 80, both hemispheres
114.7
2720
Male, age 74, both hemispheres
105.5
Medial parabrachial nucleus nTPM: 115.9
2170
Female, age 91, both hemispheres
136.1
2786
Male, age 76, both hemispheres
118.6
2156
Male, age 61, both hemispheres
109.6
2854
Male, age 80, both hemispheres
108.7
2463
Female, age 85, right hemisphere
106.8
Medial periolivary nuclei nTPM: 109.3
2063
Male, age 76, both hemispheres
123.7
2081
Male, age 80, both hemispheres
111.1
2791
Male, age 74, right hemisphere
108.0
2171
Female, age 85, both hemispheres
103.9
2458
Female, age 91, both hemispheres
100.1
Motor facial nucleus nTPM: 108.3
2062
Male, age 76, both hemispheres
129.6
2126
Male, age 61, both hemispheres
121.3
2697
Female, age 85, both hemispheres
102.3
2365
Male, age 74, right hemisphere
102.1
2795
Female, age 91, both hemispheres
101.9
2327
Male, age 80, both hemispheres
92.3
Motor trigeminal nucleus nTPM: 107.1
2335
Male, age 61, both hemispheres
109.8
2309
Male, age 76, both hemispheres
109.6
2560
Male, age 74, both hemispheres
108.1
2079
Male, age 80, both hemispheres
105.0
2321
Female, age 91, both hemispheres
102.9
Nuclei of the trapezoid body nTPM: 107.3
1983
Male, age 76, both hemispheres
120.7
2159
Male, age 61, both hemispheres
111.3
2166
Male, age 80, both hemispheres
107.8
2735
Female, age 85, both hemispheres
99.3
2368
Female, age 91, both hemispheres
97.4
Nucleus raphe magnus nTPM: 104.6
2160
Male, age 61, both hemispheres
124.9
2051
Male, age 76, both hemispheres
110.2
2172
Female, age 85, both hemispheres
107.1
2455
Male, age 74, both hemispheres
97.0
2328
Male, age 80, both hemispheres
94.5
2459
Female, age 91, both hemispheres
93.9
Paramedian reticular nucleus nTPM: 120.4
2050
Female, age 85, both hemispheres
126.6
2057
Male, age 80, both hemispheres
122.1
2052
Male, age 76, both hemispheres
121.2
2313
Male, age 61, both hemispheres
111.7
Pedunculopontine tegmental nucleus nTPM: 111.9
2334
Male, age 80, both hemispheres
118.8
1921
Female, age 85, both hemispheres
109.8
2338
Male, age 61, both hemispheres
107.0
Pontine nuclei nTPM: 114.7
2109
Female, age 72, unknown
123.1
1863
Male, age 55, unknown
119.9
2787
Female, age 85, both hemispheres
119.9
1968
Male, age 76, left hemisphere
118.7
2727
Male, age 61, right hemisphere
114.9
2115
Male, age 80, left hemisphere
111.4
2319
Female, age 91, both hemispheres
106.1
2454
Male, age 74, left hemisphere
103.9
Pontine raphe nucleus nTPM: 134.3
2853
Male, age 76, midline
148.8
2122
Female, age 85, midline
119.8
Posteroventral cochlear nucleus nTPM: 111.7
2135
Female, age 91, both hemispheres
120.3
2341
Male, age 80, both hemispheres
119.3
2070
Male, age 76, both hemispheres
107.2
2371
Male, age 61, both hemispheres
106.5
2752
Female, age 85, both hemispheres
105.2
Principal sensory trigeminal nucleus nTPM: 109.5
2158
Male, age 61, both hemispheres
119.6
2367
Female, age 91, left hemisphere
108.7
2324
Male, age 76, both hemispheres
108.0
2008
Male, age 80, left hemisphere
101.7
Reticular pontine nucleus, caudal nTPM: 109.2
2092
Male, age 76, both hemispheres
120.1
2559
Male, age 74, both hemispheres
118.6
2457
Female, age 91, both hemispheres
106.2
2332
Male, age 80, right hemisphere
91.8
Reticular pontine nucleus, oral nTPM: 109.6
2167
Male, age 76, both hemispheres
121.0
1939
Male, age 80, both hemispheres
120.4
2012
Female, age 85, both hemispheres
116.2
2366
Female, age 91, both hemispheres
97.6
2361
Male, age 74, both hemispheres
92.8
Reticulotegmental nucleus nTPM: 110.5
2325
Male, age 76, both hemispheres
126.4
2452
Male, age 74, both hemispheres
112.2
2322
Female, age 91, both hemispheres
103.0
2333
Male, age 80, both hemispheres
100.3
Spinal trigeminal nucleus, oral nTPM: 101.3
2164
Male, age 80, both hemispheres
107.3
1978
Male, age 76, both hemispheres
100.3
2737
Female, age 85, both hemispheres
96.5
Subcoeruleus area nTPM: 109.1
2369
Female, age 85, left hemisphere
112.4
1958
Male, age 80, both hemispheres
112.0
2089
Male, age 76, left hemisphere
111.5
2323
Female, age 91, left hemisphere
105.9
2451
Male, age 74, both hemispheres
103.8
Superior olive nTPM: 109.9
2020
Male, age 76, both hemispheres
125.7
1875
Female, age 85, both hemispheres
113.2
2364
Male, age 74, right hemisphere
110.1
2561
Female, age 91, both hemispheres
101.2
2329
Male, age 80, right hemisphere
99.1
Ventral periolivary nuclei nTPM: 103.2
2023
Male, age 76, both hemispheres
117.9
2130
Female, age 85, both hemispheres
102.8
2165
Male, age 80, both hemispheres
98.7
2794
Female, age 91, left hemisphere
93.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 105.0
1959
Male, age 76, both hemispheres
118.6
2359
Male, age 61, both hemispheres
112.2
2840
Female, age 85, both hemispheres
103.1
2449
Male, age 74, both hemispheres
101.5
2161
Male, age 80, both hemispheres
97.7
2456
Female, age 91, both hemispheres
97.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
