HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:428.7 nTPM
HPA Brain:213.9 nTPM
GTEx:428.7 nTPM
FANTOM5:189.2 Scaled Tags Per Million
Pig:49.9 nTPM
Mouse:463.4 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003886
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 213.9
Sample id Sample description nTPM
Hippocampus
nTPM: 178.5
1898 Male, age 80, left hemisphere 231.4
2621 Female, age 67, right hemisphere 197.5
2529 Female, age 94, left hemisphere 192.4
1911 Female, age 85, right hemisphere 158.9
2148 Female, age 91, left hemisphere 151.0
1855 Male, age 76, left hemisphere 139.8
Dentate gyrus
nTPM: 177.3
2530 Female, age 94, left hemisphere 265.6
1927 Female, age 91, both hemispheres 184.4
2531 Female, age 67, both hemispheres 168.5
2010 Male, age 76, both hemispheres 167.8
2246 Female, age 85, both hemispheres 153.8
2528 Male, age 74, both hemispheres 123.6
Entorhinal gyrus
nTPM: 179.2
2764 Male, age 80, right hemisphere 221.9
1938 Female, age 85, left hemisphere 186.3
2686 Male, age 75, right hemisphere 175.1
2613 Female, age 94, left hemisphere 172.9
1787 Male, age 76, left hemisphere 170.6
2117 Female, age 91, right hemisphere 148.3
Hippocampus, CA1
nTPM: 185.5
2749 Male, age 80, left hemisphere 302.2
2527 Male, age 74, both hemispheres 189.5
1873 Female, age 85, both hemispheres 171.9
2082 Female, age 91, right hemisphere 134.5
2045 Male, age 76, both hemispheres 129.4
Hippocampus, CA2
nTPM: 186.5
1963 Male, age 80, left hemisphere 250.5
2437 Female, age 94, left hemisphere 202.3
1892 Male, age 76, both hemispheres 199.7
2249 Male, age 74, both hemispheres 162.2
1940 Female, age 85, left hemisphere 157.8
2113 Female, age 91, right hemisphere 146.5
Hippocampus, CA3
nTPM: 171.0
2137 Male, age 80, left hemisphere 210.3
1867 Male, age 76, both hemispheres 190.5
2861 Female, age 67, both hemispheres 185.9
2436 Male, age 74, both hemispheres 160.9
1891 Female, age 85, both hemispheres 146.0
2620 Female, age 94, left hemisphere 132.5
Parahippocampal cortex
nTPM: 187.1
2245 Female, age 91, both hemispheres 232.0
1850 Male, age 80, both hemispheres 221.1
2250 Female, age 67, right hemisphere 201.5
2532 Female, age 72, left hemisphere 193.8
1990 Female, age 91, right hemisphere 190.4
1933 Female, age 85, both hemispheres 187.1
2622 Female, age 67, right hemisphere 179.2
2692 Male, age 74, both hemispheres 163.6
2018 Male, age 76, both hemispheres 160.0
2693 Female, age 94, both hemispheres 142.6
Perirhinal gyrus
nTPM: 213.9
1847 Female, age 91, left hemisphere 254.5
1794 Male, age 80, right hemisphere 248.8
1841 Female, age 85, right hemisphere 214.6
2521 Female, age 94, right hemisphere 189.9
2848 Male, age 76, right hemisphere 161.7
Subiculum
nTPM: 161.1
1977 Female, age 85, both hemispheres 189.8
1901 Male, age 80, both hemispheres 188.5
2438 Female, age 94, left hemisphere 180.4
2619 Male, age 74, both hemispheres 155.7
2042 Male, age 76, both hemispheres 135.0
2729 Female, age 91, right hemisphere 117.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 428.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 428.7
Samples: 197

Max nTPM: 1240.7
Min nTPM: 181.0
Std nTPM: 133.1
Median nTPM: 410.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1240.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 866.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 864.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 862.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 798.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 717.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 687.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 673.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 671.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 637.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 634.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 189.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 189.2
FF:10169-103B7 60 years, female 194.2
FF:10153-102I9 76 years, female 184.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.9
Pig sample Sample description nTPM
Subiculum
nTPM: 42.9
Samples: 4

Max nTPM: 54.4
Min nTPM: 37.3
Sample A Female 54.4
Sample B Female 42.4
Sample C Male 37.5
Sample D Male 37.3
Dorsal hippocampus
nTPM: 49.9
Samples: 4

Max nTPM: 60.8
Min nTPM: 35.3
Sample A Female 60.8
Sample B Female 47.9
Sample C Male 55.4
Sample D Male 35.3
Entorhinal cortex
nTPM: 47.4
Samples: 4

Max nTPM: 61.0
Min nTPM: 35.8
Sample A Female 45.2
Sample B Female 61.0
Sample C Male 47.6
Sample D Male 35.8
Ventral hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 53.4
Min nTPM: 36.7
Sample A Female 53.4
Sample B Female 36.7
Sample C Male 48.7
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 463.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 424.6
Samples: 4

Max nTPM: 457.9
Min nTPM: 375.4
Sample A Male 415.5
Sample B Male 449.6
Sample C Female 457.9
Sample D Female 375.4
Hippocampal formation
nTPM: 463.4
Samples: 4

Max nTPM: 535.4
Min nTPM: 411.5
Sample A Male 535.4
Sample B Male 411.5
Sample C Female 431.3
Sample D Female 475.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
71234620 Antisense, RP_050505_02_D08, Mouse strain C57BL/6J (56 days, male) 8.5
74743256 Antisense, RP_060220_04_E02, Mouse strain C57BL/6J (56 days, male) 6.2

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