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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
210.1
nTPM
FANTOM5:
193.8
Scaled Tags Per Million
Pig:
81.9
nTPM
Allen mouse:
9.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
210.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 158.1
2188
Female, age 91, both hemispheres
196.2
2090
Male, age 80, both hemispheres
154.9
2301
Female, age 85, both hemispheres
142.2
1984
Male, age 76, both hemispheres
139.1
Dorsal cochlear nucleus nTPM: 157.4
2187
Female, age 91, both hemispheres
181.7
2058
Male, age 76, both hemispheres
170.4
2802
Male, age 74, right hemisphere
161.8
2370
Male, age 61, both hemispheres
151.2
2378
Male, age 80, both hemispheres
121.8
Dorsal tegmental nucleus nTPM: 169.6
2083
Male, age 80, both hemispheres
205.8
2358
Male, age 61, both hemispheres
168.0
2326
Male, age 74, both hemispheres
159.9
1936
Male, age 76, left hemisphere
144.5
Dorsolateral tegmental area nTPM: 163.1
2751
Female, age 85, both hemispheres
194.6
2654
Male, age 80, both hemispheres
187.8
2141
Male, age 76, both hemispheres
175.4
2337
Male, age 61, both hemispheres
140.3
2360
Male, age 74, both hemispheres
117.1
Kolliker-Fuse nucleus nTPM: 177.6
2163
Male, age 80, both hemispheres
204.6
2793
Female, age 91, left hemisphere
182.4
2315
Male, age 76, right hemisphere
145.7
Lateral lemniscal nuclei nTPM: 176.7
2169
Male, age 76, both hemispheres
231.4
2453
Male, age 74, right hemisphere
190.6
2746
Female, age 85, left hemisphere
180.3
2320
Female, age 91, left hemisphere
142.7
2036
Male, age 80, both hemispheres
138.5
Lateral parabrachial nucleus nTPM: 161.9
2139
Female, age 85, right hemisphere
209.1
2013
Male, age 80, both hemispheres
165.2
2790
Male, age 61, both hemispheres
151.0
2792
Male, age 76, both hemispheres
122.1
Lateral vestibular nucleus nTPM: 178.8
2184
Male, age 76, both hemispheres
193.4
2311
Male, age 80, both hemispheres
164.1
Locus coeruleus nTPM: 185.5
2123
Female, age 91, both hemispheres
227.2
2014
Male, age 55, unknown
192.4
2720
Male, age 74, both hemispheres
189.3
1980
Male, age 76, both hemispheres
181.9
2788
Male, age 74, unknown
176.2
2162
Male, age 80, both hemispheres
174.5
2317
Female, age 72, unknown
156.8
Medial parabrachial nucleus nTPM: 182.8
2170
Female, age 91, both hemispheres
220.5
2854
Male, age 80, both hemispheres
190.7
2156
Male, age 61, both hemispheres
182.2
2786
Male, age 76, both hemispheres
162.6
2463
Female, age 85, right hemisphere
158.1
Medial periolivary nuclei nTPM: 177.7
2171
Female, age 85, both hemispheres
240.6
2063
Male, age 76, both hemispheres
231.7
2791
Male, age 74, right hemisphere
145.2
2458
Female, age 91, both hemispheres
145.0
2081
Male, age 80, both hemispheres
126.0
Motor facial nucleus nTPM: 183.1
2062
Male, age 76, both hemispheres
247.4
2365
Male, age 74, right hemisphere
201.9
2697
Female, age 85, both hemispheres
190.3
2126
Male, age 61, both hemispheres
160.9
2327
Male, age 80, both hemispheres
149.8
2795
Female, age 91, both hemispheres
148.6
Motor trigeminal nucleus nTPM: 162.0
2335
Male, age 61, both hemispheres
174.9
2079
Male, age 80, both hemispheres
173.9
2309
Male, age 76, both hemispheres
168.4
2560
Male, age 74, both hemispheres
160.4
2321
Female, age 91, both hemispheres
132.5
Nuclei of the trapezoid body nTPM: 208.3
1983
Male, age 76, both hemispheres
270.0
2159
Male, age 61, both hemispheres
255.2
2735
Female, age 85, both hemispheres
220.8
2166
Male, age 80, both hemispheres
163.6
2368
Female, age 91, both hemispheres
132.1
Nucleus raphe magnus nTPM: 201.2
2160
Male, age 61, both hemispheres
279.9
2172
Female, age 85, both hemispheres
250.8
2455
Male, age 74, both hemispheres
205.1
2051
Male, age 76, both hemispheres
179.0
2328
Male, age 80, both hemispheres
166.7
2459
Female, age 91, both hemispheres
125.8
Paramedian reticular nucleus nTPM: 194.5
2050
Female, age 85, both hemispheres
242.2
2057
Male, age 80, both hemispheres
197.4
2313
Male, age 61, both hemispheres
190.8
2052
Male, age 76, both hemispheres
147.4
Pedunculopontine tegmental nucleus nTPM: 177.0
2334
Male, age 80, both hemispheres
187.2
1921
Female, age 85, both hemispheres
183.2
2338
Male, age 61, both hemispheres
160.7
Pontine nuclei nTPM: 210.1
2787
Female, age 85, both hemispheres
291.9
1863
Male, age 55, unknown
260.9
2727
Male, age 61, right hemisphere
228.8
1968
Male, age 76, left hemisphere
221.5
2109
Female, age 72, unknown
197.4
2454
Male, age 74, left hemisphere
174.4
2319
Female, age 91, both hemispheres
164.4
2115
Male, age 80, left hemisphere
141.7
Pontine raphe nucleus nTPM: 204.2
2122
Female, age 85, midline
224.4
2853
Male, age 76, midline
184.1
Posteroventral cochlear nucleus nTPM: 165.2
2752
Female, age 85, both hemispheres
212.8
2070
Male, age 76, both hemispheres
169.1
2135
Female, age 91, both hemispheres
155.5
2341
Male, age 80, both hemispheres
145.5
2371
Male, age 61, both hemispheres
143.0
Principal sensory trigeminal nucleus nTPM: 194.7
2158
Male, age 61, both hemispheres
257.6
2008
Male, age 80, left hemisphere
185.0
2324
Male, age 76, both hemispheres
184.5
2367
Female, age 91, left hemisphere
151.6
Reticular pontine nucleus, caudal nTPM: 173.7
2092
Male, age 76, both hemispheres
219.8
2559
Male, age 74, both hemispheres
172.3
2332
Male, age 80, right hemisphere
154.8
2457
Female, age 91, both hemispheres
147.8
Reticular pontine nucleus, oral nTPM: 178.0
2012
Female, age 85, both hemispheres
204.3
1939
Male, age 80, both hemispheres
195.3
2167
Male, age 76, both hemispheres
194.2
2366
Female, age 91, both hemispheres
187.1
2361
Male, age 74, both hemispheres
109.3
Reticulotegmental nucleus nTPM: 168.1
2325
Male, age 76, both hemispheres
192.8
2452
Male, age 74, both hemispheres
164.5
2322
Female, age 91, both hemispheres
163.1
2333
Male, age 80, both hemispheres
151.9
Spinal trigeminal nucleus, oral nTPM: 174.5
2737
Female, age 85, both hemispheres
186.3
1978
Male, age 76, both hemispheres
169.4
2164
Male, age 80, both hemispheres
168.0
Subcoeruleus area nTPM: 188.1
2323
Female, age 91, left hemisphere
214.3
1958
Male, age 80, both hemispheres
212.6
2451
Male, age 74, both hemispheres
183.0
2369
Female, age 85, left hemisphere
167.3
2089
Male, age 76, left hemisphere
163.2
Superior olive nTPM: 173.3
1875
Female, age 85, both hemispheres
229.0
2020
Male, age 76, both hemispheres
198.9
2364
Male, age 74, right hemisphere
161.1
2329
Male, age 80, right hemisphere
145.4
2561
Female, age 91, both hemispheres
131.9
Ventral periolivary nuclei nTPM: 185.3
2165
Male, age 80, both hemispheres
216.2
2130
Female, age 85, both hemispheres
211.5
2023
Male, age 76, both hemispheres
167.7
2794
Female, age 91, left hemisphere
145.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 172.9
2840
Female, age 85, both hemispheres
214.3
1959
Male, age 76, both hemispheres
201.1
2449
Male, age 74, both hemispheres
185.4
2161
Male, age 80, both hemispheres
163.9
2359
Male, age 61, both hemispheres
151.7
2456
Female, age 91, both hemispheres
121.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
81.9
Pig sample
Sample description
nTPM
Pons nTPM: 81.9
Samples: 4
Max nTPM: 94.3
Min nTPM: 67.0
Sample A
Female
77.8
Sample B
Female
67.0
Sample C
Male
94.3
Sample D
Male
88.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
