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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
123.3
nTPM
GTEx:
123.3
nTPM
FANTOM5:
94.6
Scaled Tags Per Million
Pig:
29.0
nTPM
Mouse:
609.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
123.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 123.3
Samples: 105
Max nTPM: 207.1
Min nTPM: 10.6
Std nTPM: 41.2
Median nTPM: 0.0
218_1
71 years, female
207.1
377_1
82 years, female
205.9
386_1
76 years, male
194.8
452_1
88 years, female
192.0
354_1
81 years, female
184.2
352_1
62 years, male
182.8
375_1
74 years, female
177.7
319_1
81 years, male
177.1
163_1
78 years, male
173.3
506_1
65 years, male
171.9
379_1
60 years, male
171.2
376_1
75 years, female
169.7
2_1
77 years, female
169.2
356_1
87 years, female
167.4
353_1
82 years, female
164.1
321_1
62 years, female
162.8
425_1
59 years, female
161.2
350_1
84 years, female
161.0
177_1
74 years, male
160.7
295_1
61 years, female
160.7
320_1
89 years, female
159.3
172_1
72 years, female
157.3
286_1
68 years, female
156.4
4_1
88 years, female
155.4
6_1
73 years, female
155.1
237_1
82 years, male
154.8
264_1
73 years, female
154.2
384_1
83 years, male
151.7
243_1
75 years, male
151.1
322_1
76 years, male
150.9
173_1
67 years, male
149.9
351_1
91 years, male
148.8
35_1
74 years, female
148.7
355_1
70 years, female
146.0
115_1
83 years, male
145.8
447_1
81 years, male
144.8
394_1
75 years, female
144.1
349_1
83 years, male
143.3
406_1
79 years, male
139.9
153_1
70 years, female
139.0
389_1
86 years, female
138.0
405_1
91 years, male
137.7
316_1
62 years, male
135.5
480_1
63 years, male
133.9
335_1
73 years, female
133.8
17_1
71 years, male
133.0
246_1
77 years, male
132.5
229_1
69 years, female
130.6
9_1
66 years, female
130.4
526_1
61 years, male
130.2
503_1
68 years, male
129.2
404_1
82 years, female
129.1
292_1
71 years, male
128.0
189_1
76 years, male
126.5
293_1
68 years, female
125.9
145_1
84 years, male
125.6
317_1
60 years, male
124.0
518_1
75 years, female
122.9
265_1
87 years, male
122.2
18_1
88 years, male
121.2
254_1
77 years, female
121.1
120_1
70 years, female
120.9
251_1
78 years, male
120.9
517_1
88 years, male
119.5
318_1
68 years, male
119.2
396_1
62 years, male
117.2
348_1
84 years, male
116.0
99_1
64 years, male
115.6
291_1
76 years, male
113.3
126_1
63 years, male
110.7
347_1
72 years, male
110.4
468_1
89 years, male
107.5
137_1
83 years, male
106.4
217_1
76 years, male
104.9
499_1
55 years, female
100.9
42_1
85 years, male
99.5
307_1
66 years, female
99.3
311_1
78 years, male
99.1
288_1
66 years, female
98.9
266_1
85 years, male
96.8
109_1
81 years, female
96.3
117_1
61 years, male
95.2
324_1
76 years, male
94.3
41_1
94 years, female
93.0
162_1
79 years, female
88.9
142_1
61 years, female
86.6
43_1
64 years, female
83.6
81_1
67 years, male
83.3
314_1
67 years, male
82.7
315_1
62 years, female
80.6
313_1
79 years, female
77.6
119_1
70 years, female
72.7
139_1
64 years, female
71.9
495_1
57 years, female
70.7
501_1
88 years, male
68.8
32_1
67 years, male
67.9
89_1
63 years, male
54.1
466_1
57 years, female
53.2
308_1
70 years, female
53.1
415_1
77 years, female
48.2
149_1
88 years, male
44.3
414_1
84 years, female
37.4
413_1
59 years, female
15.2
490_1
67 years, female
15.1
491_1
89 years, female
10.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.