HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:5833.6 nTPM
HPA Brain:2989.6 nTPM
GTEx:5833.6 nTPM
FANTOM5:152.9 Scaled Tags Per Million
Mouse:3483.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody CAB008623
Glial cells High
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2989.6
Sample id Sample description nTPM
Hippocampus
nTPM: 2989.6
1855 Male, age 76, left hemisphere 3313.3
2529 Female, age 94, left hemisphere 3148.6
2621 Female, age 67, right hemisphere 3118.5
1898 Male, age 80, left hemisphere 3009.2
2148 Female, age 91, left hemisphere 2737.2
1911 Female, age 85, right hemisphere 2610.9
Dentate gyrus
nTPM: 2628.6
2530 Female, age 94, left hemisphere 3996.9
2010 Male, age 76, both hemispheres 3217.9
2246 Female, age 85, both hemispheres 2692.9
2531 Female, age 67, both hemispheres 2249.2
2528 Male, age 74, both hemispheres 1908.7
1927 Female, age 91, both hemispheres 1706.2
Entorhinal gyrus
nTPM: 2731.0
2686 Male, age 75, right hemisphere 3414.9
2117 Female, age 91, right hemisphere 3386.7
2764 Male, age 80, right hemisphere 2781.8
1787 Male, age 76, left hemisphere 2608.1
1938 Female, age 85, left hemisphere 2309.7
2613 Female, age 94, left hemisphere 1884.8
Hippocampus, CA1
nTPM: 2586.2
2749 Male, age 80, left hemisphere 2892.1
2527 Male, age 74, both hemispheres 2768.9
2045 Male, age 76, both hemispheres 2515.2
1873 Female, age 85, both hemispheres 2445.4
2082 Female, age 91, right hemisphere 2309.3
Hippocampus, CA2
nTPM: 2498.1
1940 Female, age 85, left hemisphere 2722.6
2113 Female, age 91, right hemisphere 2654.7
1892 Male, age 76, both hemispheres 2476.8
2437 Female, age 94, left hemisphere 2430.6
1963 Male, age 80, left hemisphere 2401.8
2249 Male, age 74, both hemispheres 2302.1
Hippocampus, CA3
nTPM: 2242.4
1867 Male, age 76, both hemispheres 2689.4
1891 Female, age 85, both hemispheres 2527.0
2861 Female, age 67, both hemispheres 2518.4
2137 Male, age 80, left hemisphere 2249.5
2620 Female, age 94, left hemisphere 1818.6
2436 Male, age 74, both hemispheres 1651.7
Parahippocampal cortex
nTPM: 2726.8
2532 Female, age 72, left hemisphere 3820.0
2245 Female, age 91, both hemispheres 3150.7
2018 Male, age 76, both hemispheres 3125.3
2692 Male, age 74, both hemispheres 2656.0
1850 Male, age 80, both hemispheres 2648.5
2622 Female, age 67, right hemisphere 2606.2
1933 Female, age 85, both hemispheres 2589.9
2250 Female, age 67, right hemisphere 2495.6
1990 Female, age 91, right hemisphere 2276.6
2693 Female, age 94, both hemispheres 1899.5
Perirhinal gyrus
nTPM: 2513.5
1794 Male, age 80, right hemisphere 2869.5
1841 Female, age 85, right hemisphere 2617.5
2521 Female, age 94, right hemisphere 2567.7
2848 Male, age 76, right hemisphere 2392.7
1847 Female, age 91, left hemisphere 2120.1
Subiculum
nTPM: 2663.8
2042 Male, age 76, both hemispheres 4129.7
1901 Male, age 80, both hemispheres 3293.1
1977 Female, age 85, both hemispheres 2785.0
2619 Male, age 74, both hemispheres 2513.7
2729 Female, age 91, right hemisphere 2062.8
2438 Female, age 94, left hemisphere 1198.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5833.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5833.6
Samples: 197

Max nTPM: 15498.1
Min nTPM: 2774.1
Std nTPM: 2092.9
Median nTPM: 5375.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15498.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 13156.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 12357.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11916.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 11201.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 10789.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 10599.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 10449.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 10020.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 9984.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 9890.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.9
FF:10169-103B7 60 years, female 171.3
FF:10153-102I9 76 years, female 134.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3483.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2280.6
Samples: 4

Max nTPM: 2611.5
Min nTPM: 1963.9
Sample A Male 2611.5
Sample B Male 2179.0
Sample C Female 2368.0
Sample D Female 1963.9
Hippocampal formation
nTPM: 3483.8
Samples: 4

Max nTPM: 4035.7
Min nTPM: 3097.8
Sample A Male 3551.3
Sample B Male 3250.4
Sample C Female 4035.7
Sample D Female 3097.8

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