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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
4699.0
nTPM
FANTOM5:
143.1
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
4699.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 3935.1
2188
Female, age 91, both hemispheres
5104.4
2090
Male, age 80, both hemispheres
4030.6
2301
Female, age 85, both hemispheres
3749.3
1984
Male, age 76, both hemispheres
2856.2
Dorsal cochlear nucleus nTPM: 3619.4
2187
Female, age 91, both hemispheres
4405.5
2802
Male, age 74, right hemisphere
3973.6
2370
Male, age 61, both hemispheres
3579.3
2378
Male, age 80, both hemispheres
3325.5
2058
Male, age 76, both hemispheres
2812.8
Dorsal tegmental nucleus nTPM: 4191.3
2083
Male, age 80, both hemispheres
4978.3
2326
Male, age 74, both hemispheres
4151.8
2358
Male, age 61, both hemispheres
4073.1
1936
Male, age 76, left hemisphere
3562.1
Dorsolateral tegmental area nTPM: 4348.8
2337
Male, age 61, both hemispheres
8229.8
2654
Male, age 80, both hemispheres
4291.3
2751
Female, age 85, both hemispheres
3551.6
2141
Male, age 76, both hemispheres
3149.5
2360
Male, age 74, both hemispheres
2521.6
Kolliker-Fuse nucleus nTPM: 4699.0
2793
Female, age 91, left hemisphere
5268.9
2315
Male, age 76, right hemisphere
4496.1
2163
Male, age 80, both hemispheres
4332.0
Lateral lemniscal nuclei nTPM: 3838.4
2320
Female, age 91, left hemisphere
4244.9
2453
Male, age 74, right hemisphere
4186.0
2746
Female, age 85, left hemisphere
3754.8
2169
Male, age 76, both hemispheres
3661.6
2036
Male, age 80, both hemispheres
3344.5
Lateral parabrachial nucleus nTPM: 4271.0
2792
Male, age 76, both hemispheres
5927.3
2139
Female, age 85, right hemisphere
3802.4
2790
Male, age 61, both hemispheres
3680.8
2013
Male, age 80, both hemispheres
3673.4
Lateral vestibular nucleus nTPM: 4319.0
2311
Male, age 80, both hemispheres
4774.0
2184
Male, age 76, both hemispheres
3863.9
Locus coeruleus nTPM: 3034.8
2162
Male, age 80, both hemispheres
3552.4
2317
Female, age 72, unknown
3476.3
2720
Male, age 74, both hemispheres
3404.4
2123
Female, age 91, both hemispheres
3053.1
2014
Male, age 55, unknown
2793.2
1980
Male, age 76, both hemispheres
2668.3
2788
Male, age 74, unknown
2296.1
Medial parabrachial nucleus nTPM: 3996.2
2170
Female, age 91, both hemispheres
5143.3
2854
Male, age 80, both hemispheres
4375.4
2156
Male, age 61, both hemispheres
4015.4
2786
Male, age 76, both hemispheres
3638.3
2463
Female, age 85, right hemisphere
2808.6
Medial periolivary nuclei nTPM: 3805.8
2458
Female, age 91, both hemispheres
4623.1
2081
Male, age 80, both hemispheres
4415.3
2171
Female, age 85, both hemispheres
3445.9
2063
Male, age 76, both hemispheres
3402.3
2791
Male, age 74, right hemisphere
3142.2
Motor facial nucleus nTPM: 3997.3
2697
Female, age 85, both hemispheres
4639.0
2795
Female, age 91, both hemispheres
4394.7
2126
Male, age 61, both hemispheres
4351.2
2365
Male, age 74, right hemisphere
3710.6
2327
Male, age 80, both hemispheres
3582.1
2062
Male, age 76, both hemispheres
3306.2
Motor trigeminal nucleus nTPM: 4484.3
2335
Male, age 61, both hemispheres
5594.2
2560
Male, age 74, both hemispheres
4754.9
2079
Male, age 80, both hemispheres
4384.7
2321
Female, age 91, both hemispheres
4275.3
2309
Male, age 76, both hemispheres
3412.6
Nuclei of the trapezoid body nTPM: 3744.0
2166
Male, age 80, both hemispheres
4470.2
1983
Male, age 76, both hemispheres
3991.5
2368
Female, age 91, both hemispheres
3825.3
2159
Male, age 61, both hemispheres
3714.3
2735
Female, age 85, both hemispheres
2718.6
Nucleus raphe magnus nTPM: 3881.5
2328
Male, age 80, both hemispheres
4326.7
2051
Male, age 76, both hemispheres
4318.6
2455
Male, age 74, both hemispheres
4282.5
2459
Female, age 91, both hemispheres
3605.0
2160
Male, age 61, both hemispheres
3415.6
2172
Female, age 85, both hemispheres
3340.7
Paramedian reticular nucleus nTPM: 3532.9
2313
Male, age 61, both hemispheres
3725.7
2052
Male, age 76, both hemispheres
3618.6
2050
Female, age 85, both hemispheres
3463.6
2057
Male, age 80, both hemispheres
3323.9
Pedunculopontine tegmental nucleus nTPM: 4218.3
2338
Male, age 61, both hemispheres
5911.7
2334
Male, age 80, both hemispheres
4092.6
1921
Female, age 85, both hemispheres
2650.6
Pontine nuclei nTPM: 4390.0
2319
Female, age 91, both hemispheres
5122.4
2454
Male, age 74, left hemisphere
4815.7
1863
Male, age 55, unknown
4745.1
2115
Male, age 80, left hemisphere
4680.4
2109
Female, age 72, unknown
4673.9
2787
Female, age 85, both hemispheres
4224.2
1968
Male, age 76, left hemisphere
3873.5
2727
Male, age 61, right hemisphere
2985.2
Pontine raphe nucleus nTPM: 3074.1
2853
Male, age 76, midline
3089.4
2122
Female, age 85, midline
3058.9
Posteroventral cochlear nucleus nTPM: 4129.3
2135
Female, age 91, both hemispheres
5184.0
2341
Male, age 80, both hemispheres
5158.3
2371
Male, age 61, both hemispheres
3966.0
2070
Male, age 76, both hemispheres
3532.0
2752
Female, age 85, both hemispheres
2806.2
Principal sensory trigeminal nucleus nTPM: 3823.3
2367
Female, age 91, left hemisphere
4653.6
2324
Male, age 76, both hemispheres
3993.7
2158
Male, age 61, both hemispheres
3905.7
2008
Male, age 80, left hemisphere
2740.2
Reticular pontine nucleus, caudal nTPM: 4356.4
2457
Female, age 91, both hemispheres
4919.6
2092
Male, age 76, both hemispheres
4426.4
2559
Male, age 74, both hemispheres
4067.1
2332
Male, age 80, right hemisphere
4012.7
Reticular pontine nucleus, oral nTPM: 4059.4
2366
Female, age 91, both hemispheres
5545.3
1939
Male, age 80, both hemispheres
3955.9
2361
Male, age 74, both hemispheres
3809.6
2167
Male, age 76, both hemispheres
3751.4
2012
Female, age 85, both hemispheres
3235.1
Reticulotegmental nucleus nTPM: 4333.2
2452
Male, age 74, both hemispheres
5087.7
2333
Male, age 80, both hemispheres
4477.0
2322
Female, age 91, both hemispheres
4417.8
2325
Male, age 76, both hemispheres
3350.2
Spinal trigeminal nucleus, oral nTPM: 3399.7
2164
Male, age 80, both hemispheres
4417.9
1978
Male, age 76, both hemispheres
3145.1
2737
Female, age 85, both hemispheres
2636.0
Subcoeruleus area nTPM: 3690.4
2369
Female, age 85, left hemisphere
4098.8
2451
Male, age 74, both hemispheres
3978.6
1958
Male, age 80, both hemispheres
3635.8
2089
Male, age 76, left hemisphere
3401.5
2323
Female, age 91, left hemisphere
3337.1
Superior olive nTPM: 3746.4
2561
Female, age 91, both hemispheres
4444.0
2329
Male, age 80, right hemisphere
4079.0
2020
Male, age 76, both hemispheres
3867.7
2364
Male, age 74, right hemisphere
3236.2
1875
Female, age 85, both hemispheres
3105.1
Ventral periolivary nuclei nTPM: 3400.9
2165
Male, age 80, both hemispheres
4354.9
2794
Female, age 91, left hemisphere
3912.2
2023
Male, age 76, both hemispheres
3349.5
2130
Female, age 85, both hemispheres
1987.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 4372.1
2359
Male, age 61, both hemispheres
5490.4
2161
Male, age 80, both hemispheres
4562.9
2840
Female, age 85, both hemispheres
4418.6
2456
Female, age 91, both hemispheres
4012.7
2449
Male, age 74, both hemispheres
3916.6
1959
Male, age 76, both hemispheres
3831.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
