HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:386.5 nTPM
HPA Brain:449.0 nTPM
GTEx:386.5 nTPM
FANTOM5:461.2 Scaled Tags Per Million
Pig:145.5 nTPM
Mouse:496.6 nTPM
Allen mouse:22.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 449.0
Sample id Sample description nTPM
Hippocampus
nTPM: 418.9
1898 Male, age 80, left hemisphere 576.7
1855 Male, age 76, left hemisphere 471.1
2621 Female, age 67, right hemisphere 454.2
2148 Female, age 91, left hemisphere 443.9
1911 Female, age 85, right hemisphere 302.2
2529 Female, age 94, left hemisphere 265.4
Dentate gyrus
nTPM: 434.4
2530 Female, age 94, left hemisphere 597.2
1927 Female, age 91, both hemispheres 505.9
2010 Male, age 76, both hemispheres 475.4
2528 Male, age 74, both hemispheres 358.4
2531 Female, age 67, both hemispheres 336.8
2246 Female, age 85, both hemispheres 332.9
Entorhinal gyrus
nTPM: 317.2
2613 Female, age 94, left hemisphere 451.2
2764 Male, age 80, right hemisphere 321.5
1938 Female, age 85, left hemisphere 306.8
2686 Male, age 75, right hemisphere 287.2
1787 Male, age 76, left hemisphere 280.8
2117 Female, age 91, right hemisphere 255.4
Hippocampus, CA1
nTPM: 449.0
2749 Male, age 80, left hemisphere 850.9
1873 Female, age 85, both hemispheres 515.7
2527 Male, age 74, both hemispheres 340.2
2045 Male, age 76, both hemispheres 300.8
2082 Female, age 91, right hemisphere 237.3
Hippocampus, CA2
nTPM: 415.1
1963 Male, age 80, left hemisphere 778.6
1892 Male, age 76, both hemispheres 575.7
2437 Female, age 94, left hemisphere 403.0
2249 Male, age 74, both hemispheres 284.6
2113 Female, age 91, right hemisphere 233.2
1940 Female, age 85, left hemisphere 215.4
Hippocampus, CA3
nTPM: 393.4
2861 Female, age 67, both hemispheres 546.4
2137 Male, age 80, left hemisphere 483.2
1867 Male, age 76, both hemispheres 401.9
2620 Female, age 94, left hemisphere 368.8
2436 Male, age 74, both hemispheres 280.9
1891 Female, age 85, both hemispheres 279.6
Parahippocampal cortex
nTPM: 274.7
2692 Male, age 74, both hemispheres 337.3
2622 Female, age 67, right hemisphere 317.7
1990 Female, age 91, right hemisphere 292.1
2245 Female, age 91, both hemispheres 291.0
1850 Male, age 80, both hemispheres 288.4
1933 Female, age 85, both hemispheres 270.4
2693 Female, age 94, both hemispheres 255.0
2532 Female, age 72, left hemisphere 244.5
2018 Male, age 76, both hemispheres 225.4
2250 Female, age 67, right hemisphere 225.3
Perirhinal gyrus
nTPM: 284.6
1847 Female, age 91, left hemisphere 372.9
1794 Male, age 80, right hemisphere 293.1
2521 Female, age 94, right hemisphere 259.3
1841 Female, age 85, right hemisphere 253.1
2848 Male, age 76, right hemisphere 244.7
Subiculum
nTPM: 299.7
1901 Male, age 80, both hemispheres 351.6
2619 Male, age 74, both hemispheres 301.2
2438 Female, age 94, left hemisphere 299.1
2729 Female, age 91, right hemisphere 298.3
1977 Female, age 85, both hemispheres 290.6
2042 Male, age 76, both hemispheres 257.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 386.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 386.5
Samples: 197

Max nTPM: 1093.6
Min nTPM: 48.3
Std nTPM: 189.5
Median nTPM: 348.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1093.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 982.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 959.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 932.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 907.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 885.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 871.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 865.6
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 823.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 821.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 768.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 461.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 461.2
FF:10169-103B7 60 years, female 695.8
FF:10153-102I9 76 years, female 226.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 145.5
Pig sample Sample description nTPM
Subiculum
nTPM: 128.2
Samples: 4

Max nTPM: 154.6
Min nTPM: 116.1
Sample A Female 154.6
Sample B Female 116.1
Sample C Male 125.4
Sample D Male 116.8
Dorsal hippocampus
nTPM: 138.2
Samples: 4

Max nTPM: 174.2
Min nTPM: 112.4
Sample A Female 174.2
Sample B Female 138.8
Sample C Male 127.2
Sample D Male 112.4
Entorhinal cortex
nTPM: 136.0
Samples: 4

Max nTPM: 141.8
Min nTPM: 122.8
Sample A Female 139.9
Sample B Female 141.8
Sample C Male 139.3
Sample D Male 122.8
Ventral hippocampus
nTPM: 145.5
Samples: 4

Max nTPM: 186.5
Min nTPM: 94.6
Sample A Female 164.4
Sample B Female 94.6
Sample C Male 186.5
Sample D Male 136.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 496.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 470.3
Samples: 4

Max nTPM: 559.9
Min nTPM: 418.1
Sample A Male 418.1
Sample B Male 443.3
Sample C Female 459.7
Sample D Female 559.9
Hippocampal formation
nTPM: 496.6
Samples: 4

Max nTPM: 531.5
Min nTPM: 465.8
Sample A Male 511.2
Sample B Male 477.8
Sample C Female 531.5
Sample D Female 465.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.2
69059973 Antisense, RP_050317_04_H06, Mouse strain C57BL/6J (56 days, male) 22.2

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