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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
438.9
nTPM
FANTOM5:
691.1
Scaled Tags Per Million
Pig:
203.4
nTPM
Allen mouse:
13.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
438.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 245.7
1984
Male, age 76, both hemispheres
298.6
2301
Female, age 85, both hemispheres
261.2
2188
Female, age 91, both hemispheres
215.2
2090
Male, age 80, both hemispheres
207.9
Dorsal cochlear nucleus nTPM: 277.2
2802
Male, age 74, right hemisphere
321.9
2058
Male, age 76, both hemispheres
306.0
2370
Male, age 61, both hemispheres
274.7
2378
Male, age 80, both hemispheres
250.9
2187
Female, age 91, both hemispheres
232.7
Dorsal tegmental nucleus nTPM: 254.4
2083
Male, age 80, both hemispheres
284.9
1936
Male, age 76, left hemisphere
266.5
2358
Male, age 61, both hemispheres
234.5
2326
Male, age 74, both hemispheres
231.6
Dorsolateral tegmental area nTPM: 240.5
2141
Male, age 76, both hemispheres
304.9
2654
Male, age 80, both hemispheres
271.5
2751
Female, age 85, both hemispheres
265.6
2360
Male, age 74, both hemispheres
211.0
2337
Male, age 61, both hemispheres
149.8
Kolliker-Fuse nucleus nTPM: 278.2
2163
Male, age 80, both hemispheres
338.3
2793
Female, age 91, left hemisphere
268.9
2315
Male, age 76, right hemisphere
227.4
Lateral lemniscal nuclei nTPM: 357.9
2169
Male, age 76, both hemispheres
423.4
2453
Male, age 74, right hemisphere
387.3
2036
Male, age 80, both hemispheres
381.7
2746
Female, age 85, left hemisphere
333.4
2320
Female, age 91, left hemisphere
263.9
Lateral parabrachial nucleus nTPM: 290.5
2139
Female, age 85, right hemisphere
384.8
2790
Male, age 61, both hemispheres
327.4
2013
Male, age 80, both hemispheres
260.5
2792
Male, age 76, both hemispheres
189.2
Lateral vestibular nucleus nTPM: 309.1
2184
Male, age 76, both hemispheres
374.9
2311
Male, age 80, both hemispheres
243.4
Locus coeruleus nTPM: 371.2
2123
Female, age 91, both hemispheres
444.3
2720
Male, age 74, both hemispheres
397.2
1980
Male, age 76, both hemispheres
388.2
2014
Male, age 55, unknown
369.7
2317
Female, age 72, unknown
359.9
2162
Male, age 80, both hemispheres
343.8
2788
Male, age 74, unknown
295.4
Medial parabrachial nucleus nTPM: 278.0
2156
Male, age 61, both hemispheres
317.5
2854
Male, age 80, both hemispheres
291.2
2786
Male, age 76, both hemispheres
265.1
2170
Female, age 91, both hemispheres
259.3
2463
Female, age 85, right hemisphere
257.0
Medial periolivary nuclei nTPM: 347.5
2063
Male, age 76, both hemispheres
464.5
2171
Female, age 85, both hemispheres
454.0
2791
Male, age 74, right hemisphere
320.2
2458
Female, age 91, both hemispheres
266.0
2081
Male, age 80, both hemispheres
232.8
Motor facial nucleus nTPM: 372.1
2062
Male, age 76, both hemispheres
515.7
2795
Female, age 91, both hemispheres
410.7
2327
Male, age 80, both hemispheres
362.9
2365
Male, age 74, right hemisphere
326.5
2126
Male, age 61, both hemispheres
308.3
2697
Female, age 85, both hemispheres
308.3
Motor trigeminal nucleus nTPM: 292.2
2560
Male, age 74, both hemispheres
354.9
2079
Male, age 80, both hemispheres
344.4
2309
Male, age 76, both hemispheres
272.5
2335
Male, age 61, both hemispheres
265.6
2321
Female, age 91, both hemispheres
223.6
Nuclei of the trapezoid body nTPM: 438.9
2159
Male, age 61, both hemispheres
604.3
2735
Female, age 85, both hemispheres
470.0
1983
Male, age 76, both hemispheres
436.5
2166
Male, age 80, both hemispheres
347.7
2368
Female, age 91, both hemispheres
336.0
Nucleus raphe magnus nTPM: 403.9
2160
Male, age 61, both hemispheres
571.9
2172
Female, age 85, both hemispheres
464.1
2455
Male, age 74, both hemispheres
371.6
2328
Male, age 80, both hemispheres
364.4
2051
Male, age 76, both hemispheres
358.2
2459
Female, age 91, both hemispheres
293.0
Paramedian reticular nucleus nTPM: 319.6
2313
Male, age 61, both hemispheres
386.1
2050
Female, age 85, both hemispheres
378.2
2057
Male, age 80, both hemispheres
312.0
2052
Male, age 76, both hemispheres
202.3
Pedunculopontine tegmental nucleus nTPM: 264.5
1921
Female, age 85, both hemispheres
298.8
2334
Male, age 80, both hemispheres
281.0
2338
Male, age 61, both hemispheres
213.6
Pontine nuclei nTPM: 371.0
2787
Female, age 85, both hemispheres
515.1
2727
Male, age 61, right hemisphere
484.3
1968
Male, age 76, left hemisphere
429.5
1863
Male, age 55, unknown
424.0
2109
Female, age 72, unknown
361.5
2454
Male, age 74, left hemisphere
272.2
2115
Male, age 80, left hemisphere
268.4
2319
Female, age 91, both hemispheres
212.9
Pontine raphe nucleus nTPM: 377.0
2122
Female, age 85, midline
397.3
2853
Male, age 76, midline
356.7
Posteroventral cochlear nucleus nTPM: 238.4
2752
Female, age 85, both hemispheres
319.6
2371
Male, age 61, both hemispheres
275.5
2070
Male, age 76, both hemispheres
275.0
2341
Male, age 80, both hemispheres
183.5
2135
Female, age 91, both hemispheres
138.6
Principal sensory trigeminal nucleus nTPM: 369.5
2158
Male, age 61, both hemispheres
564.6
2008
Male, age 80, left hemisphere
367.3
2324
Male, age 76, both hemispheres
319.6
2367
Female, age 91, left hemisphere
226.4
Reticular pontine nucleus, caudal nTPM: 314.7
2332
Male, age 80, right hemisphere
398.2
2092
Male, age 76, both hemispheres
358.5
2457
Female, age 91, both hemispheres
272.9
2559
Male, age 74, both hemispheres
229.4
Reticular pontine nucleus, oral nTPM: 281.4
2012
Female, age 85, both hemispheres
344.1
2167
Male, age 76, both hemispheres
291.4
2361
Male, age 74, both hemispheres
276.7
1939
Male, age 80, both hemispheres
267.4
2366
Female, age 91, both hemispheres
227.7
Reticulotegmental nucleus nTPM: 309.5
2325
Male, age 76, both hemispheres
356.1
2452
Male, age 74, both hemispheres
327.1
2333
Male, age 80, both hemispheres
291.5
2322
Female, age 91, both hemispheres
263.5
Spinal trigeminal nucleus, oral nTPM: 296.2
2164
Male, age 80, both hemispheres
319.0
2737
Female, age 85, both hemispheres
314.6
1978
Male, age 76, both hemispheres
255.0
Subcoeruleus area nTPM: 295.3
2089
Male, age 76, left hemisphere
334.1
1958
Male, age 80, both hemispheres
311.1
2323
Female, age 91, left hemisphere
300.6
2451
Male, age 74, both hemispheres
286.5
2369
Female, age 85, left hemisphere
244.0
Superior olive nTPM: 329.8
1875
Female, age 85, both hemispheres
394.3
2020
Male, age 76, both hemispheres
337.8
2329
Male, age 80, right hemisphere
332.1
2561
Female, age 91, both hemispheres
309.1
2364
Male, age 74, right hemisphere
275.7
Ventral periolivary nuclei nTPM: 363.6
2130
Female, age 85, both hemispheres
454.4
2165
Male, age 80, both hemispheres
403.2
2794
Female, age 91, left hemisphere
301.5
2023
Male, age 76, both hemispheres
295.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 324.1
1959
Male, age 76, both hemispheres
355.2
2449
Male, age 74, both hemispheres
352.3
2161
Male, age 80, both hemispheres
315.4
2359
Male, age 61, both hemispheres
315.4
2840
Female, age 85, both hemispheres
306.6
2456
Female, age 91, both hemispheres
299.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
203.4
Pig sample
Sample description
nTPM
Pons nTPM: 203.5
Samples: 4
Max nTPM: 240.4
Min nTPM: 183.0
Sample A
Female
240.4
Sample B
Female
191.8
Sample C
Male
183.0
Sample D
Male
198.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.