HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:531.7 nTPM
HPA Brain:199.2 nTPM
GTEx:531.7 nTPM
FANTOM5:227.2 Scaled Tags Per Million
Pig:178.2 nTPM
Mouse:1528.1 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 199.2
Sample id Sample description nTPM
Hippocampus
nTPM: 143.9
1898 Male, age 80, left hemisphere 204.0
1855 Male, age 76, left hemisphere 158.7
1911 Female, age 85, right hemisphere 137.6
2529 Female, age 94, left hemisphere 136.2
2621 Female, age 67, right hemisphere 125.0
2148 Female, age 91, left hemisphere 102.1
Dentate gyrus
nTPM: 150.1
1927 Female, age 91, both hemispheres 190.2
2010 Male, age 76, both hemispheres 184.6
2246 Female, age 85, both hemispheres 145.0
2528 Male, age 74, both hemispheres 139.0
2530 Female, age 94, left hemisphere 131.5
2531 Female, age 67, both hemispheres 110.2
Entorhinal gyrus
nTPM: 120.7
1938 Female, age 85, left hemisphere 142.5
2764 Male, age 80, right hemisphere 142.3
1787 Male, age 76, left hemisphere 140.2
2613 Female, age 94, left hemisphere 104.8
2686 Male, age 75, right hemisphere 102.3
2117 Female, age 91, right hemisphere 92.1
Hippocampus, CA1
nTPM: 166.9
2749 Male, age 80, left hemisphere 242.7
1873 Female, age 85, both hemispheres 182.5
2527 Male, age 74, both hemispheres 150.4
2045 Male, age 76, both hemispheres 149.3
2082 Female, age 91, right hemisphere 109.5
Hippocampus, CA2
nTPM: 155.0
1892 Male, age 76, both hemispheres 204.3
1963 Male, age 80, left hemisphere 193.5
2249 Male, age 74, both hemispheres 165.8
1940 Female, age 85, left hemisphere 130.1
2437 Female, age 94, left hemisphere 127.9
2113 Female, age 91, right hemisphere 108.1
Hippocampus, CA3
nTPM: 150.7
1867 Male, age 76, both hemispheres 189.5
2436 Male, age 74, both hemispheres 177.5
2137 Male, age 80, left hemisphere 177.1
1891 Female, age 85, both hemispheres 155.3
2620 Female, age 94, left hemisphere 118.6
2861 Female, age 67, both hemispheres 86.3
Parahippocampal cortex
nTPM: 142.4
1850 Male, age 80, both hemispheres 205.3
2250 Female, age 67, right hemisphere 182.8
1933 Female, age 85, both hemispheres 169.4
1990 Female, age 91, right hemisphere 168.6
2018 Male, age 76, both hemispheres 147.7
2693 Female, age 94, both hemispheres 133.4
2245 Female, age 91, both hemispheres 125.9
2532 Female, age 72, left hemisphere 114.7
2692 Male, age 74, both hemispheres 95.6
2622 Female, age 67, right hemisphere 80.6
Perirhinal gyrus
nTPM: 199.2
1847 Female, age 91, left hemisphere 237.1
1794 Male, age 80, right hemisphere 220.7
1841 Female, age 85, right hemisphere 219.6
2521 Female, age 94, right hemisphere 174.2
2848 Male, age 76, right hemisphere 144.3
Subiculum
nTPM: 141.5
2438 Female, age 94, left hemisphere 177.3
1977 Female, age 85, both hemispheres 161.6
1901 Male, age 80, both hemispheres 158.6
2042 Male, age 76, both hemispheres 129.0
2729 Female, age 91, right hemisphere 113.7
2619 Male, age 74, both hemispheres 108.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 531.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 531.7
Samples: 197

Max nTPM: 2734.2
Min nTPM: 212.3
Std nTPM: 239.5
Median nTPM: 507.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2734.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1275.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1145.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1109.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 948.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 925.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 906.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 903.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 903.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 900.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 892.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 227.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 227.2
FF:10169-103B7 60 years, female 307.4
FF:10153-102I9 76 years, female 147.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 178.2
Pig sample Sample description nTPM
Subiculum
nTPM: 156.3
Samples: 4

Max nTPM: 217.3
Min nTPM: 121.1
Sample A Female 217.3
Sample B Female 160.3
Sample C Male 126.3
Sample D Male 121.1
Dorsal hippocampus
nTPM: 178.2
Samples: 4

Max nTPM: 236.5
Min nTPM: 130.0
Sample A Female 236.5
Sample B Female 164.1
Sample C Male 182.3
Sample D Male 130.0
Entorhinal cortex
nTPM: 176.2
Samples: 4

Max nTPM: 257.3
Min nTPM: 128.4
Sample A Female 156.6
Sample B Female 257.3
Sample C Male 162.5
Sample D Male 128.4
Ventral hippocampus
nTPM: 157.2
Samples: 4

Max nTPM: 189.5
Min nTPM: 133.2
Sample A Female 189.5
Sample B Female 133.2
Sample C Male 144.6
Sample D Male 161.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1528.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1445.4
Samples: 4

Max nTPM: 1613.7
Min nTPM: 1317.2
Sample A Male 1351.6
Sample B Male 1499.0
Sample C Female 1613.7
Sample D Female 1317.2
Hippocampal formation
nTPM: 1528.1
Samples: 4

Max nTPM: 1980.3
Min nTPM: 1372.0
Sample A Male 1980.3
Sample B Male 1379.9
Sample C Female 1372.0
Sample D Female 1380.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
68203444 Antisense, RP_041018_01_C03, Mouse strain C57BL/6J (56 days, male) 10.1
67862431 Antisense, RP_041018_01_C03, Mouse strain C57BL/6J (56 days, male) 9.5

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