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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
237.5
nTPM
GTEx:
237.5
nTPM
FANTOM5:
106.7
Scaled Tags Per Million
Pig:
78.6
nTPM
Mouse:
1070.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
237.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 237.5
Samples: 105
Max nTPM: 375.2
Min nTPM: 136.9
Std nTPM: 49.9
Median nTPM:
491_1
89 years, female
375.2
501_1
88 years, male
370.6
162_1
79 years, female
356.1
466_1
57 years, female
348.8
413_1
59 years, female
339.9
89_1
63 years, male
339.3
490_1
67 years, female
338.0
414_1
84 years, female
335.2
142_1
61 years, female
333.2
415_1
77 years, female
326.9
153_1
70 years, female
301.4
149_1
88 years, male
298.1
313_1
79 years, female
296.5
308_1
70 years, female
292.0
139_1
64 years, female
288.4
17_1
71 years, male
287.5
81_1
67 years, male
287.4
120_1
70 years, female
287.0
315_1
62 years, female
282.7
119_1
70 years, female
281.3
126_1
63 years, male
277.8
32_1
67 years, male
275.7
35_1
74 years, female
272.9
109_1
81 years, female
271.5
117_1
61 years, male
267.6
495_1
57 years, female
265.3
18_1
88 years, male
264.6
4_1
88 years, female
263.2
396_1
62 years, male
262.5
217_1
76 years, male
259.1
2_1
77 years, female
257.0
266_1
85 years, male
256.0
324_1
76 years, male
251.5
377_1
82 years, female
250.7
145_1
84 years, male
249.3
468_1
89 years, male
249.1
322_1
76 years, male
248.9
499_1
55 years, female
248.6
518_1
75 years, female
248.2
99_1
64 years, male
246.8
9_1
66 years, female
242.3
316_1
62 years, male
242.1
43_1
64 years, female
241.9
246_1
77 years, male
240.7
137_1
83 years, male
239.0
526_1
61 years, male
237.6
42_1
85 years, male
234.9
319_1
81 years, male
234.2
115_1
83 years, male
233.5
288_1
66 years, female
233.1
41_1
94 years, female
232.2
6_1
73 years, female
231.2
229_1
69 years, female
229.2
480_1
63 years, male
228.6
375_1
74 years, female
225.6
321_1
62 years, female
224.1
265_1
87 years, male
223.5
311_1
78 years, male
223.4
307_1
66 years, female
222.7
347_1
72 years, male
222.7
404_1
82 years, female
222.4
379_1
60 years, male
220.0
389_1
86 years, female
219.3
243_1
75 years, male
217.8
173_1
67 years, male
216.7
286_1
68 years, female
215.6
335_1
73 years, female
214.5
254_1
77 years, female
213.5
405_1
91 years, male
212.2
352_1
62 years, male
211.0
394_1
75 years, female
209.8
376_1
75 years, female
209.7
350_1
84 years, female
209.4
320_1
89 years, female
206.3
386_1
76 years, male
205.0
452_1
88 years, female
205.0
172_1
72 years, female
204.4
517_1
88 years, male
203.9
425_1
59 years, female
201.4
349_1
83 years, male
200.2
447_1
81 years, male
199.6
384_1
83 years, male
195.8
348_1
84 years, male
194.3
406_1
79 years, male
193.8
503_1
68 years, male
193.0
317_1
60 years, male
191.4
237_1
82 years, male
191.3
506_1
65 years, male
191.0
292_1
71 years, male
190.9
318_1
68 years, male
188.0
354_1
81 years, female
187.6
355_1
70 years, female
187.1
189_1
76 years, male
184.1
264_1
73 years, female
183.1
314_1
67 years, male
181.1
251_1
78 years, male
180.4
295_1
61 years, female
180.2
351_1
91 years, male
178.1
353_1
82 years, female
176.6
356_1
87 years, female
173.8
293_1
68 years, female
173.4
177_1
74 years, male
171.1
291_1
76 years, male
163.8
163_1
78 years, male
143.2
218_1
71 years, female
136.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.