HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:355.6 nTPM
HPA Brain:342.4 nTPM
GTEx:355.6 nTPM
FANTOM5:306.5 Scaled Tags Per Million
Pig:333.5 nTPM
Mouse:112.7 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030528Antibody CAB020787
Glial cells LowLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 342.4
Sample id Sample description nTPM
Hippocampus
nTPM: 287.7
2529 Female, age 94, left hemisphere 378.9
1911 Female, age 85, right hemisphere 319.9
1898 Male, age 80, left hemisphere 280.6
2621 Female, age 67, right hemisphere 275.8
1855 Male, age 76, left hemisphere 244.0
2148 Female, age 91, left hemisphere 226.8
Dentate gyrus
nTPM: 256.5
2530 Female, age 94, left hemisphere 409.8
2528 Male, age 74, both hemispheres 284.8
2010 Male, age 76, both hemispheres 270.1
2246 Female, age 85, both hemispheres 249.8
2531 Female, age 67, both hemispheres 176.4
1927 Female, age 91, both hemispheres 148.3
Entorhinal gyrus
nTPM: 299.4
2117 Female, age 91, right hemisphere 461.1
2764 Male, age 80, right hemisphere 314.7
1938 Female, age 85, left hemisphere 272.3
1787 Male, age 76, left hemisphere 267.5
2686 Male, age 75, right hemisphere 241.7
2613 Female, age 94, left hemisphere 238.8
Hippocampus, CA1
nTPM: 221.4
2527 Male, age 74, both hemispheres 299.1
1873 Female, age 85, both hemispheres 251.1
2082 Female, age 91, right hemisphere 207.4
2749 Male, age 80, left hemisphere 179.8
2045 Male, age 76, both hemispheres 169.6
Hippocampus, CA2
nTPM: 247.7
2249 Male, age 74, both hemispheres 327.7
2437 Female, age 94, left hemisphere 291.6
1963 Male, age 80, left hemisphere 265.4
2113 Female, age 91, right hemisphere 226.8
1940 Female, age 85, left hemisphere 216.4
1892 Male, age 76, both hemispheres 158.1
Hippocampus, CA3
nTPM: 203.8
1891 Female, age 85, both hemispheres 298.1
1867 Male, age 76, both hemispheres 213.8
2620 Female, age 94, left hemisphere 212.6
2436 Male, age 74, both hemispheres 200.4
2861 Female, age 67, both hemispheres 170.8
2137 Male, age 80, left hemisphere 127.2
Parahippocampal cortex
nTPM: 245.0
2692 Male, age 74, both hemispheres 328.7
2532 Female, age 72, left hemisphere 290.3
2018 Male, age 76, both hemispheres 265.5
1933 Female, age 85, both hemispheres 251.0
2245 Female, age 91, both hemispheres 237.8
1990 Female, age 91, right hemisphere 234.9
2693 Female, age 94, both hemispheres 219.6
1850 Male, age 80, both hemispheres 219.2
2250 Female, age 67, right hemisphere 218.5
2622 Female, age 67, right hemisphere 184.3
Perirhinal gyrus
nTPM: 187.4
2848 Male, age 76, right hemisphere 220.7
2521 Female, age 94, right hemisphere 196.4
1794 Male, age 80, right hemisphere 188.8
1847 Female, age 91, left hemisphere 170.8
1841 Female, age 85, right hemisphere 160.3
Subiculum
nTPM: 342.4
2042 Male, age 76, both hemispheres 459.0
1901 Male, age 80, both hemispheres 350.1
2619 Male, age 74, both hemispheres 328.5
1977 Female, age 85, both hemispheres 321.8
2438 Female, age 94, left hemisphere 309.7
2729 Female, age 91, right hemisphere 285.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 355.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 355.6
Samples: 197

Max nTPM: 990.2
Min nTPM: 88.4
Std nTPM: 145.4
Median nTPM: 332.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 990.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 857.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 800.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 787.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 771.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 731.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 723.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 637.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 603.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 587.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 584.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 306.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 306.5
FF:10153-102I9 76 years, female 334.8
FF:10169-103B7 60 years, female 278.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 333.5
Pig sample Sample description nTPM
Subiculum
nTPM: 202.4
Samples: 4

Max nTPM: 262.6
Min nTPM: 154.2
Sample A Female 262.6
Sample B Female 200.6
Sample C Male 154.2
Sample D Male 192.2
Dorsal hippocampus
nTPM: 333.5
Samples: 4

Max nTPM: 537.1
Min nTPM: 119.6
Sample A Female 537.1
Sample B Female 208.8
Sample C Male 468.6
Sample D Male 119.6
Entorhinal cortex
nTPM: 159.3
Samples: 4

Max nTPM: 180.1
Min nTPM: 126.9
Sample A Female 126.9
Sample B Female 180.1
Sample C Male 175.7
Sample D Male 154.4
Ventral hippocampus
nTPM: 224.5
Samples: 4

Max nTPM: 267.4
Min nTPM: 128.2
Sample A Female 250.5
Sample B Female 128.2
Sample C Male 251.9
Sample D Male 267.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.7
Samples: 4

Max nTPM: 145.0
Min nTPM: 94.4
Sample A Male 94.4
Sample B Male 105.3
Sample C Female 106.0
Sample D Female 145.0
Hippocampal formation
nTPM: 96.4
Samples: 4

Max nTPM: 102.2
Min nTPM: 90.9
Sample A Male 102.2
Sample B Male 90.9
Sample C Female 92.2
Sample D Female 100.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 6.8
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 5.9
672 Sense, RPS_Baylor_37014, Mouse strain C57BL/6J (56 days, male) 0.4

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