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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
723.3
nTPM
FANTOM5:
579.5
Scaled Tags Per Million
Pig:
676.0
nTPM
Allen mouse:
2.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
723.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 723.3
2301
Female, age 85, both hemispheres
1055.3
2188
Female, age 91, both hemispheres
839.0
2090
Male, age 80, both hemispheres
618.3
1984
Male, age 76, both hemispheres
380.7
Dorsal cochlear nucleus nTPM: 530.1
2187
Female, age 91, both hemispheres
720.8
2378
Male, age 80, both hemispheres
536.5
2802
Male, age 74, right hemisphere
531.8
2370
Male, age 61, both hemispheres
462.8
2058
Male, age 76, both hemispheres
398.6
Dorsal tegmental nucleus nTPM: 489.7
2083
Male, age 80, both hemispheres
673.1
2326
Male, age 74, both hemispheres
511.1
1936
Male, age 76, left hemisphere
440.9
2358
Male, age 61, both hemispheres
333.8
Dorsolateral tegmental area nTPM: 524.0
2751
Female, age 85, both hemispheres
817.8
2654
Male, age 80, both hemispheres
662.7
2337
Male, age 61, both hemispheres
507.5
2360
Male, age 74, both hemispheres
323.0
2141
Male, age 76, both hemispheres
309.3
Kolliker-Fuse nucleus nTPM: 637.1
2793
Female, age 91, left hemisphere
920.3
2163
Male, age 80, both hemispheres
531.8
2315
Male, age 76, right hemisphere
459.4
Lateral lemniscal nuclei nTPM: 508.6
2320
Female, age 91, left hemisphere
738.3
2746
Female, age 85, left hemisphere
497.0
2169
Male, age 76, both hemispheres
479.3
2036
Male, age 80, both hemispheres
433.7
2453
Male, age 74, right hemisphere
394.6
Lateral parabrachial nucleus nTPM: 581.8
2792
Male, age 76, both hemispheres
995.7
2013
Male, age 80, both hemispheres
551.5
2139
Female, age 85, right hemisphere
422.8
2790
Male, age 61, both hemispheres
357.1
Lateral vestibular nucleus nTPM: 666.3
2311
Male, age 80, both hemispheres
784.7
2184
Male, age 76, both hemispheres
547.8
Locus coeruleus nTPM: 306.9
2162
Male, age 80, both hemispheres
373.1
2720
Male, age 74, both hemispheres
371.5
2317
Female, age 72, unknown
359.6
2123
Female, age 91, both hemispheres
271.4
2014
Male, age 55, unknown
265.5
2788
Male, age 74, unknown
259.9
1980
Male, age 76, both hemispheres
247.7
Medial parabrachial nucleus nTPM: 644.0
2170
Female, age 91, both hemispheres
877.0
2463
Female, age 85, right hemisphere
741.7
2854
Male, age 80, both hemispheres
684.9
2786
Male, age 76, both hemispheres
539.9
2156
Male, age 61, both hemispheres
376.3
Medial periolivary nuclei nTPM: 499.5
2458
Female, age 91, both hemispheres
597.3
2081
Male, age 80, both hemispheres
573.8
2791
Male, age 74, right hemisphere
571.1
2063
Male, age 76, both hemispheres
427.2
2171
Female, age 85, both hemispheres
328.3
Motor facial nucleus nTPM: 547.9
2697
Female, age 85, both hemispheres
697.6
2126
Male, age 61, both hemispheres
659.0
2795
Female, age 91, both hemispheres
564.0
2365
Male, age 74, right hemisphere
563.9
2062
Male, age 76, both hemispheres
407.6
2327
Male, age 80, both hemispheres
395.5
Motor trigeminal nucleus nTPM: 511.4
2321
Female, age 91, both hemispheres
647.8
2560
Male, age 74, both hemispheres
546.4
2309
Male, age 76, both hemispheres
485.5
2335
Male, age 61, both hemispheres
451.0
2079
Male, age 80, both hemispheres
426.6
Nuclei of the trapezoid body nTPM: 447.6
2166
Male, age 80, both hemispheres
586.6
2368
Female, age 91, both hemispheres
557.1
1983
Male, age 76, both hemispheres
417.2
2159
Male, age 61, both hemispheres
403.2
2735
Female, age 85, both hemispheres
274.1
Nucleus raphe magnus nTPM: 412.1
2459
Female, age 91, both hemispheres
560.9
2328
Male, age 80, both hemispheres
515.8
2051
Male, age 76, both hemispheres
507.9
2455
Male, age 74, both hemispheres
424.1
2160
Male, age 61, both hemispheres
255.2
2172
Female, age 85, both hemispheres
208.9
Paramedian reticular nucleus nTPM: 490.5
2057
Male, age 80, both hemispheres
538.7
2050
Female, age 85, both hemispheres
518.3
2052
Male, age 76, both hemispheres
457.7
2313
Male, age 61, both hemispheres
447.3
Pedunculopontine tegmental nucleus nTPM: 458.3
2334
Male, age 80, both hemispheres
545.0
1921
Female, age 85, both hemispheres
428.7
2338
Male, age 61, both hemispheres
401.1
Pontine nuclei nTPM: 528.5
2319
Female, age 91, both hemispheres
770.6
2454
Male, age 74, left hemisphere
716.6
2109
Female, age 72, unknown
656.1
1863
Male, age 55, unknown
515.3
1968
Male, age 76, left hemisphere
496.2
2115
Male, age 80, left hemisphere
487.1
2787
Female, age 85, both hemispheres
315.6
2727
Male, age 61, right hemisphere
270.0
Pontine raphe nucleus nTPM: 390.9
2853
Male, age 76, midline
427.7
2122
Female, age 85, midline
354.1
Posteroventral cochlear nucleus nTPM: 640.5
2135
Female, age 91, both hemispheres
882.9
2341
Male, age 80, both hemispheres
837.2
2070
Male, age 76, both hemispheres
537.8
2371
Male, age 61, both hemispheres
535.3
2752
Female, age 85, both hemispheres
409.2
Principal sensory trigeminal nucleus nTPM: 489.4
2367
Female, age 91, left hemisphere
739.3
2324
Male, age 76, both hemispheres
538.3
2008
Male, age 80, left hemisphere
376.2
2158
Male, age 61, both hemispheres
303.7
Reticular pontine nucleus, caudal nTPM: 569.8
2457
Female, age 91, both hemispheres
664.7
2559
Male, age 74, both hemispheres
657.2
2092
Male, age 76, both hemispheres
564.9
2332
Male, age 80, right hemisphere
392.4
Reticular pontine nucleus, oral nTPM: 638.0
2366
Female, age 91, both hemispheres
805.7
2361
Male, age 74, both hemispheres
647.4
1939
Male, age 80, both hemispheres
636.9
2167
Male, age 76, both hemispheres
571.7
2012
Female, age 85, both hemispheres
528.5
Reticulotegmental nucleus nTPM: 513.6
2322
Female, age 91, both hemispheres
661.5
2333
Male, age 80, both hemispheres
537.4
2452
Male, age 74, both hemispheres
489.8
2325
Male, age 76, both hemispheres
365.7
Spinal trigeminal nucleus, oral nTPM: 476.6
2164
Male, age 80, both hemispheres
571.8
1978
Male, age 76, both hemispheres
451.7
2737
Female, age 85, both hemispheres
406.4
Subcoeruleus area nTPM: 529.3
2369
Female, age 85, left hemisphere
861.8
1958
Male, age 80, both hemispheres
544.6
2089
Male, age 76, left hemisphere
485.0
2323
Female, age 91, left hemisphere
380.3
2451
Male, age 74, both hemispheres
374.6
Superior olive nTPM: 556.2
2020
Male, age 76, both hemispheres
602.9
2364
Male, age 74, right hemisphere
592.8
2329
Male, age 80, right hemisphere
582.1
2561
Female, age 91, both hemispheres
574.3
1875
Female, age 85, both hemispheres
429.2
Ventral periolivary nuclei nTPM: 469.9
2023
Male, age 76, both hemispheres
636.7
2165
Male, age 80, both hemispheres
482.5
2794
Female, age 91, left hemisphere
439.4
2130
Female, age 85, both hemispheres
321.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 534.6
2456
Female, age 91, both hemispheres
649.2
2840
Female, age 85, both hemispheres
560.0
1959
Male, age 76, both hemispheres
541.0
2161
Male, age 80, both hemispheres
526.8
2359
Male, age 61, both hemispheres
477.3
2449
Male, age 74, both hemispheres
453.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
676.0
Pig sample
Sample description
nTPM
Pons nTPM: 676.0
Samples: 4
Max nTPM: 1160.0
Min nTPM: 376.9
Sample A
Female
524.4
Sample B
Female
376.9
Sample C
Male
642.8
Sample D
Male
1160.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
