PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:205.1 nTPM
FANTOM5:236.5 Scaled Tags Per Million
Mouse:68.6 nTPM
Allen mouse:3.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 205.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 119.3
2090 Male, age 80, both hemispheres 140.9
2301 Female, age 85, both hemispheres 113.3
1984 Male, age 76, both hemispheres 113.1
2188 Female, age 91, both hemispheres 109.8
Area postrema
nTPM: 205.1
2799 Male, age 61, both hemispheres 347.6
2306 Male, age 80, both hemispheres 158.1
2054 Male, age 76, both hemispheres 109.6
Dorsal cochlear nucleus
nTPM: 135.1
2378 Male, age 80, both hemispheres 150.4
2370 Male, age 61, both hemispheres 143.9
2802 Male, age 74, right hemisphere 136.5
2058 Male, age 76, both hemispheres 131.5
2187 Female, age 91, both hemispheres 113.2
Dorsal medullary reticular nucleus
nTPM: 107.0
2373 Male, age 61, both hemispheres 117.0
2040 Female, age 85, both hemispheres 105.6
2088 Male, age 76, both hemispheres 98.4
Dorsal motor vagal complex
nTPM: 115.6
2797 Male, age 61, both hemispheres 166.7
2185 Male, age 76, both hemispheres 119.5
2000 Male, age 74, unknown 114.3
2813 Female, age 72, unknown 113.1
2643 Male, age 74, both hemispheres 108.9
2807 Female, age 85, both hemispheres 108.3
2844 Male, age 55, unknown 103.6
2133 Female, age 91, both hemispheres 90.7
Dorsal tegmental nucleus
nTPM: 144.0
2358 Male, age 61, both hemispheres 186.9
1936 Male, age 76, left hemisphere 135.7
2083 Male, age 80, both hemispheres 134.9
2326 Male, age 74, both hemispheres 118.5
Dorsolateral tegmental area
nTPM: 142.1
2337 Male, age 61, both hemispheres 190.7
2654 Male, age 80, both hemispheres 140.1
2751 Female, age 85, both hemispheres 137.4
2360 Male, age 74, both hemispheres 127.5
2141 Male, age 76, both hemispheres 115.0
Gigantocellular reticular nuclei, medullary
nTPM: 119.2
2314 Male, age 61, both hemispheres 136.7
1876 Female, age 85, both hemispheres 128.8
2387 Female, age 91, both hemispheres 123.1
2462 Male, age 74, both hemispheres 113.5
2310 Male, age 80, both hemispheres 111.8
2022 Male, age 76, right hemisphere 101.1
Gigantocellular reticular nuclei, pars
nTPM: 110.1
2706 Male, age 80, both hemispheres 125.2
2330 Male, age 80, both hemispheres 118.7
2084 Female, age 85, both hemispheres 111.5
2336 Male, age 61, both hemispheres 104.6
2168 Male, age 76, both hemispheres 90.4
Inferior olive
nTPM: 169.9
2379 Male, age 80, both hemispheres 189.1
2085 Female, age 85, both hemispheres 177.8
2563 Male, age 74, both hemispheres 174.5
2178 Male, age 61, both hemispheres 172.7
2628 Female, age 91, both hemispheres 135.5
Kolliker-Fuse nucleus
nTPM: 153.2
2315 Male, age 76, right hemisphere 236.1
2163 Male, age 80, both hemispheres 117.2
2793 Female, age 91, left hemisphere 106.4
Lateral lemniscal nuclei
nTPM: 102.3
2746 Female, age 85, left hemisphere 124.3
2453 Male, age 74, right hemisphere 99.4
2320 Female, age 91, left hemisphere 98.3
2036 Male, age 80, both hemispheres 96.4
2169 Male, age 76, both hemispheres 93.0
Lateral medullary reticular nucleus
nTPM: 139.1
2852 Male, age 80, both hemispheres 156.1
2804 Female, age 91, both hemispheres 148.6
2190 Female, age 85, both hemispheres 140.6
2374 Male, age 61, both hemispheres 135.5
2305 Male, age 74, both hemispheres 134.1
2044 Male, age 76, both hemispheres 119.4
Lateral parabrachial nucleus
nTPM: 157.7
2792 Male, age 76, both hemispheres 189.5
2790 Male, age 61, both hemispheres 171.9
2139 Female, age 85, right hemisphere 135.3
2013 Male, age 80, both hemispheres 134.1
Lateral vestibular nucleus
nTPM: 120.9
2311 Male, age 80, both hemispheres 126.3
2184 Male, age 76, both hemispheres 115.5
Locus coeruleus
nTPM: 107.6
2317 Female, age 72, unknown 134.5
1980 Male, age 76, both hemispheres 110.4
2123 Female, age 91, both hemispheres 109.6
2014 Male, age 55, unknown 108.7
2162 Male, age 80, both hemispheres 104.5
2788 Male, age 74, unknown 97.6
2720 Male, age 74, both hemispheres 87.7
Medial olivary nucleus
nTPM: 182.5
1962 Male, age 76, both hemispheres 226.2
2138 Female, age 91, both hemispheres 180.6
1943 Male, age 61, both hemispheres 168.9
2851 Male, age 80, both hemispheres 154.3
Medial parabrachial nucleus
nTPM: 124.8
2156 Male, age 61, both hemispheres 153.2
2463 Female, age 85, right hemisphere 122.2
2170 Female, age 91, both hemispheres 117.6
2786 Male, age 76, both hemispheres 117.1
2854 Male, age 80, both hemispheres 114.0
Medial periolivary nuclei
nTPM: 112.4
2791 Male, age 74, right hemisphere 133.1
2081 Male, age 80, both hemispheres 122.3
2063 Male, age 76, both hemispheres 111.1
2458 Female, age 91, both hemispheres 100.2
2171 Female, age 85, both hemispheres 95.1
Medial vestibular nucleus
nTPM: 120.3
2624 Male, age 61, both hemispheres 129.0
2743 Female, age 85, both hemispheres 126.2
2093 Male, age 80, both hemispheres 125.6
2801 Male, age 74, both hemispheres 119.5
2134 Male, age 76, both hemispheres 117.6
2803 Female, age 91, both hemispheres 104.0
Motor facial nucleus
nTPM: 109.9
2795 Female, age 91, both hemispheres 138.9
2126 Male, age 61, both hemispheres 116.7
2365 Male, age 74, right hemisphere 111.1
2062 Male, age 76, both hemispheres 111.0
2697 Female, age 85, both hemispheres 92.3
2327 Male, age 80, both hemispheres 89.5
Motor hypoglossal nucleus
nTPM: 104.7
2125 Female, age 91, both hemispheres 112.5
2182 Male, age 80, both hemispheres 112.5
2277 Male, age 76, both hemispheres 100.8
2461 Male, age 61, both hemispheres 99.1
2132 Female, age 85, both hemispheres 98.5
Motor trigeminal nucleus
nTPM: 111.9
2335 Male, age 61, both hemispheres 126.4
2309 Male, age 76, both hemispheres 117.8
2560 Male, age 74, both hemispheres 110.3
2079 Male, age 80, both hemispheres 103.2
2321 Female, age 91, both hemispheres 101.9
Nuclei of the trapezoid body
nTPM: 101.1
1983 Male, age 76, both hemispheres 116.8
2368 Female, age 91, both hemispheres 114.0
2166 Male, age 80, both hemispheres 103.4
2735 Female, age 85, both hemispheres 93.9
2159 Male, age 61, both hemispheres 77.4
Nucleus ambiguus
nTPM: 155.9
2071 Male, age 76, both hemispheres 212.8
2096 Female, age 85, both hemispheres 98.9
Nucleus cuneatus
nTPM: 129.9
2808 Female, age 85, both hemispheres 158.1
2380 Male, age 80, both hemispheres 147.7
2564 Male, age 74, both hemispheres 141.2
2562 Male, age 61, both hemispheres 135.7
2376 Male, age 61, both hemispheres 133.2
2100 Male, age 76, both hemispheres 122.0
2805 Female, age 91, both hemispheres 119.6
2381 Male, age 80, both hemispheres 112.7
2131 Male, age 76, both hemispheres 98.5
Nucleus gracilis
nTPM: 133.1
2299 Female, age 85, both hemispheres 139.6
2627 Male, age 74, both hemispheres 135.8
2382 Male, age 80, both hemispheres 124.0
Nucleus raphe magnus
nTPM: 98.3
2051 Male, age 76, both hemispheres 135.0
2455 Male, age 74, both hemispheres 113.6
2459 Female, age 91, both hemispheres 101.1
2328 Male, age 80, both hemispheres 94.8
2172 Female, age 85, both hemispheres 74.5
2160 Male, age 61, both hemispheres 70.5
Nucleus raphe obscurus
nTPM: 164.0
2142 Male, age 76, midline 212.3
2845 Female, age 85, midline 145.0
2800 Male, age 61, midline 134.8
Nucleus raphe pallidus
nTPM: 190.6
1924 Male, age 61, midline 246.7
2145 Male, age 76, midline 197.9
2183 Male, age 80, midline 127.2
Nucleus tractus solitarii
nTPM: 101.8
2144 Female, age 91, right hemisphere 118.4
2191 Female, age 85, both hemispheres 105.3
2656 Male, age 76, both hemispheres 95.0
2307 Male, age 80, both hemispheres 88.6
Paramedian reticular nucleus
nTPM: 111.7
2057 Male, age 80, both hemispheres 125.8
2052 Male, age 76, both hemispheres 120.9
2050 Female, age 85, both hemispheres 101.2
2313 Male, age 61, both hemispheres 99.1
Parvicellular reticular nuclei
nTPM: 127.2
2119 Male, age 80, both hemispheres 142.4
2095 Male, age 76, both hemispheres 140.0
2558 Male, age 74, both hemispheres 99.4
Parvicellular reticular nuclei, medullary
nTPM: 105.7
2091 Female, age 85, both hemispheres 111.9
2189 Female, age 91, both hemispheres 104.2
2181 Male, age 80, left hemisphere 101.0
Pedunculopontine tegmental nucleus
nTPM: 131.9
2338 Male, age 61, both hemispheres 164.0
2334 Male, age 80, both hemispheres 124.5
1921 Female, age 85, both hemispheres 107.1
Peritrigeminal nucleus
nTPM: 143.7
2136 Male, age 76, both hemispheres 153.8
2067 Female, age 85, both hemispheres 151.6
2179 Male, age 61, both hemispheres 125.6
Pontine nuclei
nTPM: 104.4
2115 Male, age 80, left hemisphere 124.4
2109 Female, age 72, unknown 116.2
1968 Male, age 76, left hemisphere 111.4
1863 Male, age 55, unknown 110.9
2319 Female, age 91, both hemispheres 105.7
2454 Male, age 74, left hemisphere 99.2
2787 Female, age 85, both hemispheres 88.5
2727 Male, age 61, right hemisphere 78.7
Pontine raphe nucleus
nTPM: 109.1
2853 Male, age 76, midline 114.3
2122 Female, age 85, midline 103.9
Posteroventral cochlear nucleus
nTPM: 122.2
2371 Male, age 61, both hemispheres 140.9
2341 Male, age 80, both hemispheres 137.2
2135 Female, age 91, both hemispheres 122.4
2070 Male, age 76, both hemispheres 112.1
2752 Female, age 85, both hemispheres 98.1
Prepositus hypoglossal nucleus
nTPM: 137.0
2086 Male, age 80, both hemispheres 140.1
2855 Female, age 85, right hemisphere 134.0
Principal sensory trigeminal nucleus
nTPM: 99.3
2324 Male, age 76, both hemispheres 124.0
2367 Female, age 91, left hemisphere 96.7
2008 Male, age 80, left hemisphere 96.0
2158 Male, age 61, both hemispheres 80.4
Reticular pontine nucleus, caudal
nTPM: 109.8
2092 Male, age 76, both hemispheres 131.9
2559 Male, age 74, both hemispheres 108.0
2457 Female, age 91, both hemispheres 107.9
2332 Male, age 80, right hemisphere 91.5
Reticular pontine nucleus, oral
nTPM: 109.8
1939 Male, age 80, both hemispheres 126.2
2167 Male, age 76, both hemispheres 117.2
2012 Female, age 85, both hemispheres 113.9
2366 Female, age 91, both hemispheres 102.9
2361 Male, age 74, both hemispheres 88.8
Reticulotegmental nucleus
nTPM: 114.7
2333 Male, age 80, both hemispheres 129.6
2452 Male, age 74, both hemispheres 114.3
2322 Female, age 91, both hemispheres 109.1
2325 Male, age 76, both hemispheres 105.6
Spinal trigeminal nucleus, caudal
nTPM: 106.7
2312 Male, age 61, both hemispheres 115.6
2308 Male, age 80, both hemispheres 111.1
2447 Male, age 76, both hemispheres 109.0
2642 Male, age 74, both hemispheres 99.4
2390 Female, age 91, both hemispheres 98.2
Spinal trigeminal nucleus, interpolar
nTPM: 105.5
2033 Male, age 80, both hemispheres 112.7
2625 Male, age 61, both hemispheres 112.5
2066 Male, age 76, right hemisphere 110.3
2389 Female, age 91, both hemispheres 96.6
2386 Female, age 85, both hemispheres 95.3
Spinal trigeminal nucleus, oral
nTPM: 101.5
2164 Male, age 80, both hemispheres 111.0
2737 Female, age 85, both hemispheres 97.8
1978 Male, age 76, both hemispheres 95.8
Spinal vestibular nucleus
nTPM: 111.9
2796 Male, age 61, both hemispheres 117.5
2384 Male, age 74, both hemispheres 116.0
2806 Female, age 85, both hemispheres 115.7
2748 Male, age 76, both hemispheres 115.1
2780 Male, age 80, both hemispheres 110.6
2186 Female, age 91, both hemispheres 96.4
Subcoeruleus area
nTPM: 113.5
2369 Female, age 85, left hemisphere 143.2
1958 Male, age 80, both hemispheres 113.0
2451 Male, age 74, both hemispheres 112.7
2089 Male, age 76, left hemisphere 104.3
2323 Female, age 91, left hemisphere 94.0
Superior olive
nTPM: 107.2
2364 Male, age 74, right hemisphere 126.8
2020 Male, age 76, both hemispheres 115.6
2561 Female, age 91, both hemispheres 102.5
2329 Male, age 80, right hemisphere 98.4
1875 Female, age 85, both hemispheres 92.8
Superior vestibular nucleus
nTPM: 140.6
2061 Male, age 76, both hemispheres 162.4
2383 Male, age 74, both hemispheres 131.2
2015 Male, age 80, both hemispheres 128.1
Ventral medullary reticular nucleus
nTPM: 120.5
2372 Male, age 61, both hemispheres 139.5
2060 Male, age 76, both hemispheres 101.6
Ventral periolivary nuclei
nTPM: 104.3
2023 Male, age 76, both hemispheres 120.7
2130 Female, age 85, both hemispheres 105.8
2165 Male, age 80, both hemispheres 99.6
2794 Female, age 91, left hemisphere 91.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 134.3
1986 Male, age 76, both hemispheres 145.4
2118 Male, age 80, both hemispheres 145.4
2302 Female, age 91, both hemispheres 130.8
2180 Male, age 61, both hemispheres 128.4
2741 Female, age 85, both hemispheres 121.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 119.0
2359 Male, age 61, both hemispheres 156.0
2456 Female, age 91, both hemispheres 120.8
1959 Male, age 76, both hemispheres 114.6
2840 Female, age 85, both hemispheres 112.3
2161 Male, age 80, both hemispheres 110.1
2449 Male, age 74, both hemispheres 100.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 236.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 203.6
FF:10165-103B3 76 years, female 210.5
FF:10182-103D2 60 years, female 196.8
Medulla oblongata
Scaled Tags Per Million: 236.5
FF:10038-101F2 18-64 years, mixed 249.7
FF:10155-103A2 76 years, female 235.0
FF:10174-103C3 60 years, female 224.8
Pons
Scaled Tags Per Million: 155.4
FF:10033-101E6 18-54 years, mixed 155.4

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 68.6
Mouse sample Sample description nTPM
67.769.770.569.472.2010203040506070
 		Pons and medulla
nTPM: 68.6
Samples: 4

Max nTPM: 72.2
Min nTPM: 62.6
Sample A Male 69.4
Sample B Male 62.6
Sample C Female 70.0
Sample D Female 72.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.5
1957 Antisense, RP_Baylor_253962, Mouse strain C57BL/6J (56 days, male) 2.5
1956 Antisense, RP_Baylor_253962, Mouse strain C57BL/6J (56 days, male) 2.4
Pons
Expression energy: 3.0
1956 Antisense, RP_Baylor_253962, Mouse strain C57BL/6J (56 days, male) 3.0
1957 Antisense, RP_Baylor_253962, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org