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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
28.1
nTPM
HPA Brain:
24.9
nTPM
GTEx:
28.1
nTPM
FANTOM5:
84.6
Scaled Tags Per Million
Pig:
24.0
nTPM
Mouse:
32.3
nTPM
Allen mouse:
3.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
24.9
Sample id
Sample description
nTPM
Amygdala nTPM: 24.9
2514
Male, age 75, right hemisphere
25.5
1987
Female, age 91, left hemisphere
25.3
2814
Male, age 76, right hemisphere
25.1
2517
Female, age 94, left hemisphere
24.7
2695
Female, age 67, right hemisphere
24.1
Basal amygdala nTPM: 21.1
2110
Male, age 80, left hemisphere
24.9
1955
Male, age 76, both hemispheres
23.8
2243
Female, age 91, right hemisphere
21.3
2609
Male, age 75, right hemisphere
21.0
2685
Female, age 94, left hemisphere
18.7
2827
Female, age 67, right hemisphere
17.2
Central amygdala nTPM: 21.9
1905
Male, age 76, both hemispheres
23.8
2239
Male, age 80, left hemisphere
23.0
2515
Male, age 75, right hemisphere
22.3
2826
Female, age 94, left hemisphere
21.2
2701
Female, age 91, right hemisphere
19.4
Corticomedial amygdala nTPM: 22.9
2829
Male, age 80, left hemisphere
25.4
2428
Male, age 75, right hemisphere
24.1
2240
Male, age 76, both hemispheres
24.0
2242
Female, age 91, right hemisphere
22.3
2429
Female, age 94, left hemisphere
21.6
2535
Female, age 67, right hemisphere
20.3
Lateral amygdala nTPM: 21.6
1883
Male, age 76, both hemispheres
24.5
2516
Male, age 75, right hemisphere
24.0
2534
Female, age 94, left hemisphere
21.9
2830
Female, age 67, right hemisphere
21.1
2256
Male, age 80, left hemisphere
20.3
2255
Female, age 91, right hemisphere
17.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
28.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 28.1
Samples: 152
Max nTPM: 47.6
Min nTPM: 20.0
Std nTPM: 4.6
Median nTPM: 27.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
47.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
42.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
40.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
40.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
40.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
39.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
39.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
38.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
38.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
37.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
37.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
36.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
36.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
35.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
34.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
34.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
34.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
32.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
32.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
31.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
31.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
31.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
31.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
30.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
30.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
30.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
30.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
30.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
29.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
29.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
29.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
29.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
29.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
29.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
29.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
29.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
29.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
28.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
28.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
28.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
28.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
28.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
28.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
28.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
28.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
28.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
28.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
28.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
28.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
28.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
28.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
27.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
27.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
27.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
27.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
27.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
27.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
27.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
27.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
27.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
27.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
27.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
27.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
27.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
26.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
26.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
26.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
26.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
26.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
26.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
26.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
26.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
26.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
26.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
26.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
26.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
26.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
26.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
26.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
25.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
25.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
25.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
25.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
25.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
25.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
25.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
25.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
25.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
25.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
25.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
25.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
25.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
25.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
25.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
25.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
25.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
25.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
25.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
25.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
25.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
24.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
24.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
24.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
24.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
24.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
24.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
24.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
24.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
24.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
24.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
24.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
24.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
24.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
24.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
24.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
24.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
23.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
23.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
23.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
23.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
23.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
23.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
23.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
22.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
22.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
22.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
22.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
22.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
21.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
21.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
21.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
21.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
20.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
32.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 32.2
Samples: 4
Max nTPM: 35.8
Min nTPM: 28.6
Sample A
Male
28.6
Sample B
Male
35.8
Sample C
Female
30.3
Sample D
Female
34.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.